RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RWDD4Q6NW29 188 aaKnown RBP27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 C4orf22Q6V702 233 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 B4GALNT4Q76KP1 1039 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 TBC1D31Q96DN5 1066 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 KLHL5Q96PQ7 755 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 NACA2Q9H009 215 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 CATSPERBQ9H7T0 1116 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 HS3ST4Q9Y661 456 aa27.12■■□□□ 1.93
ATPAF1-202ENST00000371937 IGLV3-27P01718 113 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 HOXC13P31276 330 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 TUBP50607 506 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 MANEALQ5VSG8 457 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 HEATR6Q6AI08 1181 aaKnown RBP27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 LILRA6Q6PI73 481 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 CCDC149Q6ZUS6 474 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 TXLNGYQ9BZA5 131 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 FAM53CQ9NYF3 392 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 PAK5Q9P286 719 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 GOLGA6BA6NDN3 693 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 GGCXP38435 758 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 ERVFC1P60507 584 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 CFAP58Q5T655 872 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 NUGGCQ68CJ6 796 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 CEP128Q6ZU80 1094 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 MRPL43Q8N983 215 aaKnown RBP27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 SPPL3Q8TCT6 385 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 BRD8Q9H0E9 1235 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 ATP8A1Q9Y2Q0 1164 aa27.11■■□□□ 1.93
ATPAF1-202ENST00000371937 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 C5orf67F2Z3F1 127 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 RB1P06400 928 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 SPATA31D3P0C874 917 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 MX2P20592 715 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 SPATA31D4Q6ZUB0 917 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 POF1BQ8WVV4 589 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 TLR9Q9NR96 1032 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 XPO7Q9UIA9 1087 aaKnown RBP27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 SHOC2Q9UQ13 582 aa27.1■■□□□ 1.93
ATPAF1-202ENST00000371937 SMAPO00193 183 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 HSD17B3P37058 310 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 RNASEH2BQ5TBB1 312 aaKnown RBP27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PPIL6Q8IXY8 311 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 HTR3CQ8WXA8 447 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 C17orf80Q9BSJ5 609 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 OGFRQ9NZT2 677 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 E9PAM4 449 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 LPXNO60711 386 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PMS2P54278 862 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PRKD1Q15139 912 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PABPC1LQ4VXU2 614 aaKnown RBP27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PIK3R6Q5UE93 754 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 LRRC31Q6UY01 552 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 HOOK3Q86VS8 718 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 IQCKQ8N0W5 287 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 LZTR1Q8N653 840 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 UBLCP1Q8WVY7 318 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 PRDM12Q9H4Q4 367 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 NEU3Q9UQ49 428 aa27.09■■□□□ 1.93
ATPAF1-202ENST00000371937 C2orf71A6NGG8 1288 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 GCATO75600 419 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 LRG1P02750 347 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 ZCCHC9Q8N567 271 aaKnown RBP27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 CCDC33Q8N5R6 958 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 CCNYQ8ND76 341 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 LGMNQ99538 433 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 FARP1Q9Y4F1 1045 aaPredicted RBP27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 NR2E3Q9Y5X4 410 aa27.08■■□□□ 1.93
ATPAF1-202ENST00000371937 C5orf60A6NFR6 353 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 STK10O94804 968 aaKnown RBP27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 GLUD1P00367 558 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 HMBSP08397 361 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 COG7P83436 770 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 AP1B1Q10567 949 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 MS4A13Q5J8X5 152 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 PLPP4Q5VZY2 271 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 CCDC25Q86WR0 208 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 KREMEN2Q8NCW0 462 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 RUFY1Q96T51 708 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 DONSONQ9NYP3 566 aa27.07■■□□□ 1.92
ATPAF1-202ENST00000371937 COCHO43405 550 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 C9orf50Q5SZB4 431 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 NPWQ8N729 165 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 PABPC3Q9H361 631 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 PPARGC1AQ9UBK2 798 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 DNAJB1P25685 340 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 NRLP54845 237 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 BASP1P80723 227 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 GALNT2Q10471 571 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 AUHQ13825 339 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 UAP1Q16222 522 aaPredicted RBP27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 KRT222Q8N1A0 295 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 MICAL1Q8TDZ2 1067 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 LRRN4Q8WUT4 740 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 CPT1BQ92523 772 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 SAMD11Q96NU1 681 aa27.06■■□□□ 1.92
ATPAF1-202ENST00000371937 CLUHO75153 1309 aa27.05■■□□□ 1.92
ATPAF1-202ENST00000371937 HIDE1A8MVS5 230 aa27.05■■□□□ 1.92
ATPAF1-202ENST00000371937 C8AP07357 584 aa27.05■■□□□ 1.92
ATPAF1-202ENST00000371937 CHKAP35790 457 aa27.05■■□□□ 1.92
ATPAF1-202ENST00000371937 HARS2P49590 506 aaKnown RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms