RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ATP5OP48047 213 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 DARS2Q6PI48 645 aaKnown RBP24.64■■□□□ 1.53
SNX3-203ENST00000368979 BZW1Q7L1Q6 419 aaKnown RBP24.64■■□□□ 1.53
SNX3-203ENST00000368979 PRUNE1Q86TP1 453 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 UNC45BQ8IWX7 931 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 ZNF683Q8IZ20 524 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 HS6ST3Q8IZP7 471 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 TBC1D31Q96DN5 1066 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 RNF38Q9H0F5 515 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 PCDH9Q9HC56 1237 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 MSRAQ9UJ68 235 aa24.64■■□□□ 1.53
SNX3-203ENST00000368979 E9PAM4 449 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 H0YGN5 161 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 OLFM2O95897 454 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 SRGAP2BP0DMP2 458 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 GABRR2P28476 465 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 HOXA9P31269 272 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 HLTFQ14527 1009 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNX3-203ENST00000368979 ACBD5Q5T8D3 534 aaPredicted RBP24.63■■□□□ 1.53
SNX3-203ENST00000368979 GAREM2Q75VX8 874 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 C14orf80Q86SX3 495 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 CDKL3Q8IVW4 592 aaPredicted RBP24.63■■□□□ 1.53
SNX3-203ENST00000368979 RSAD2Q8WXG1 361 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 PLD4Q96BZ4 506 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 QKIQ96PU8 341 aaKnown RBP eCLIP24.63■■□□□ 1.537e-15■□□□□ 9.3
SNX3-203ENST00000368979 LMAN2LQ9H0V9 348 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 CERS4Q9HA82 394 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 ZDHHC18Q9NUE0 388 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 RAD54BQ9Y620 910 aa24.63■■□□□ 1.53
SNX3-203ENST00000368979 CFAP69A5D8W1 941 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 CCL16O15467 120 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 FGF10O15520 208 aaPredicted RBP24.62■■□□□ 1.53
SNX3-203ENST00000368979 ETS1P14921 441 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 EPCAMP16422 314 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 STIP1P31948 543 aaKnown RBP24.62■■□□□ 1.53
SNX3-203ENST00000368979 KCNQ1P51787 676 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 COG7P83436 770 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 SLC45A4Q5BKX6 768 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 PPP2R2DQ66LE6 453 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 EMBQ6PCB8 327 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 ZDHHC24Q6UX98 284 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 B4GALNT4Q76KP1 1039 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 NPWQ8N729 165 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 RTP4Q96DX8 246 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 SNF8Q96H20 258 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 PRMT1Q99873 361 aaKnown RBP24.62■■□□□ 1.53
SNX3-203ENST00000368979 KLF16Q9BXK1 252 aaPredicted RBP24.62■■□□□ 1.53
SNX3-203ENST00000368979 USP29Q9HBJ7 922 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 ZNF446Q9NWS9 450 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 WHRNQ9P202 907 aa24.62■■□□□ 1.53
SNX3-203ENST00000368979 HACD1B0YJ81 288 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 ZSCAN5DPP0CG00 497 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 RWDD4Q6NW29 188 aaKnown RBP24.61■■□□□ 1.53
SNX3-203ENST00000368979 PDZD4Q76G19 769 aaPredicted RBP24.61■■□□□ 1.53
SNX3-203ENST00000368979 FAM71DQ8N9W8 422 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 FAM129AQ9BZQ8 928 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 CATSPERBQ9H7T0 1116 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 CLUHO75153 1309 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 DENND4CQ5VZ89 1909 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 IGLV3-10A0A075B6K4 115 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 IFNB1P01574 187 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 RBL1P28749 1068 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 BMP8BP34820 402 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 SERPINB6P35237 376 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 ADCY8P40145 1251 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 VPS41P49754 854 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 EPHA5P54756 1037 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 AUHQ13825 339 aaKnown RBP24.61■■□□□ 1.53
SNX3-203ENST00000368979 NADSYN1Q6IA69 706 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 ART4Q93070 314 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 CAVIN3Q969G5 261 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 ZFRQ96KR1 1074 aaKnown RBP24.61■■□□□ 1.53
SNX3-203ENST00000368979 KLC2Q9H0B6 622 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 ASAH2Q9NR71 780 aa24.61■■□□□ 1.53
SNX3-203ENST00000368979 PPARGC1AQ9UBK2 798 aaKnown RBP24.61■■□□□ 1.53
SNX3-203ENST00000368979 WASH4PA8MWX3 477 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 TP73O15350 636 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 RFPL2O75678 378 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 STC2O76061 302 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 HNRNPA1P09651 372 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNX3-203ENST00000368979 FAM153BP0C7A2 387 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 ITIH2P19823 946 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 CDC25CP30307 473 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 CYP4F8P98187 520 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 FAM153CQ494X1 144 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 ADGRD2Q7Z7M1 963 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 ARNTL2Q8WYA1 636 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 MRPS31Q92665 395 aaKnown RBP24.6■■□□□ 1.53
SNX3-203ENST00000368979 CORO1BQ9BR76 489 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 FAM153AQ9UHL3 310 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 VANGL2Q9ULK5 521 aa24.6■■□□□ 1.53
SNX3-203ENST00000368979 PER2O15055 1255 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 KCNN4O15554 427 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 HARS2P49590 506 aaKnown RBP24.59■■□□□ 1.53
SNX3-203ENST00000368979 PLTPP55058 493 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 CALCOCO2Q13137 446 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 PDK1Q15118 436 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 PRKD1Q15139 912 aaPredicted RBP24.59■■□□□ 1.53
SNX3-203ENST00000368979 RAP1GAP2Q684P5 730 aa24.59■■□□□ 1.53
SNX3-203ENST00000368979 TXNDC8Q6A555 127 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms