RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZCCHC8Q6NZY4 707 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 NT5DC3Q86UY8 548 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 UNC93AQ86WB7 457 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 NXPE1Q8N323 547 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 SLC4A11Q8NBS3 891 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 MSANTD4Q8NCY6 345 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CYB5D2Q8WUJ1 264 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CPA5Q8WXQ8 436 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 VWCEQ96DN2 955 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 PBKQ96KB5 322 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 SDCBP2Q9H190 292 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 MRPL47Q9HD33 250 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 GDAP2Q9NXN4 497 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 ADAM22Q9P0K1 906 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 SNX9Q9Y5X1 595 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 PRRC2BQ5JSZ5 2229 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 TMEM8BA6NDV4 472 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 MIF4GDA9UHW6 222 aaKnown RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 PTGESO14684 152 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CALCAP01258 141 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 THP07101 528 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CD19P15391 556 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 MLH1P40692 756 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CDH8P55286 799 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 ID3Q02535 119 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 PRSS53Q2L4Q9 553 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 SGO2Q562F6 1265 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 ABHD17CQ6PCB6 329 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 DEFB128Q7Z7B8 93 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 ARHGEF39Q8N4T4 335 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 KCTD13Q8WZ19 329 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 HES6Q96HZ4 224 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 SELENOOQ9BVL4 669 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CXCL16Q9H2A7 254 aa9.17□□□□□ -0.94
TPM3-213ENST00000368545 CGGBP1Q9UFW8 167 aaPredicted RBP9.17□□□□□ -0.94
TPM3-213ENST00000368545 BRCA2P51587 3418 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 ELOA3DA6NLF2 546 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 KPNA7A9QM74 516 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 TMPRSS2O15393 492 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 SRGAP2O75044 1071 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ADRB1P08588 477 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 FAM163BP0C2L3 166 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 MMP8P22894 467 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 NDST1P52848 882 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ADAM15Q13444 863 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 SLBPQ14493 270 aaKnown RBP eCLIP9.16□□□□□ -0.94
TPM3-213ENST00000368545 CLUL1Q15846 466 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ELOA3BQ3SY89 546 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 CFAP221Q4G0U5 840 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 PRAMEF13Q5VWM6 474 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 GTF2IRD2BQ6EKJ0 949 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RSRC2Q7L4I2 434 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 GTF2IRD2Q86UP8 949 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 CREG2Q8IUH2 290 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 CCDC105Q8IYK2 499 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 EFHBQ8N7U6 833 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 TMEM145Q8NBT3 493 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 GALNT11Q8NCW6 608 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ELOA3Q8NG57 546 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 TFAP2BQ92481 460 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RABGGTAQ92696 567 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ADAM2Q99965 735 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 FTHL17Q9BXU8 183 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ELOVL4Q9GZR5 314 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 GP6Q9HCN6 339 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 STARD13Q9Y3M8 1113 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 PCDHA9Q9Y5H5 950 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 ARL5CA6NH57 179 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 PPEF2O14830 753 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 MGEA5O60502 916 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ADAM11O75078 769 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RRM1P23921 792 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RPL9P32969 192 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 GSCP56915 257 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 SOX4Q06945 474 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 CNGA2Q16280 664 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 POMZP3Q6PJE2 187 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 MAMDC2Q7Z304 686 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 UBL4BQ8N7F7 174 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 C1orf131Q8NDD1 294 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 APPL2Q8NEU8 664 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 C1orf159Q96HA4 380 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 CAPZA3Q96KX2 299 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 ZSWIM1Q9BR11 485 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 MIS12Q9H081 205 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 RGS18Q9NS28 235 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 PARVAQ9NVD7 372 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 HMGXB4Q9UGU5 601 aa9.16□□□□□ -0.94
TPM3-213ENST00000368545 ANAPC7Q9UJX3 599 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms