RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ADSSP30520 456 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 IFNA8P32881 189 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 HDAC4P56524 1084 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 AARS2Q5JTZ9 985 aaKnown RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 DUPD1Q68J44 220 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 HERC6Q8IVU3 1022 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 TMEM120AQ9BXJ8 343 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 PDZD7Q9H5P4 517 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 COG4Q9H9E3 785 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 RIC8BQ9NVN3 520 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 A0A096LPK6 155 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 TM9SF1O15321 606 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 AKAP10O43572 662 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ERBB2P04626 1255 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ITGB6P18564 788 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SPIRE1Q08AE8 756 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ITIH5Q86UX2 942 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 RAB42Q8N4Z0 105 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 EIF2AQ9BY44 585 aaKnown RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 BRD8Q9H0E9 1235 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 DMAC2Q9NW81 257 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 COG5Q9UP83 839 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ERCC2P18074 760 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 PGAM1P18669 254 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SH3BGRP55822 239 aaPredicted RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 IKBKEQ14164 716 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ZCCHC23Q6ZST2 131 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ALLCQ8N6M5 410 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 A0A0A0MRY4 1105 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 ZBTB22O15209 634 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 BUD23O43709 281 aaKnown RBP12.6□□□□□ -0.39
PTPRK-203ENST00000368207 FLT3P36888 993 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 KCNK10P57789 538 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 DDR2Q16832 855 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SEL1L3Q68CR1 1132 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 UGT3A1Q6NUS8 523 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 FAM35AQ86V20 835 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 DPF3Q92784 378 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SPATA13Q96N96 652 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SLC25A13Q9UJS0 675 aa12.6□□□□□ -0.39
PTPRK-203ENST00000368207 SEC24DO94855 1032 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 SCTRP47872 440 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 ITGA7Q13683 1181 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 NCKIPSDQ9NZQ3 722 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 TCRBV7S2A1N4TA0A589 114 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 TSPAN1O60635 241 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 ITIH4Q14624 930 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 CNGA3Q16281 694 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 C16orf46Q6P387 395 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 SUGP1Q8IWZ8 645 aaKnown RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 NDRG1Q92597 394 aaKnown RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 EME1Q96AY2 570 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 NRBF2Q96F24 287 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 TPST1O60507 370 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 ATP5C1P36542 298 aaKnown RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 MATKP42679 507 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 INPP5AQ14642 412 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 CYTH1Q15438 398 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 PARP6Q2NL67 630 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 APTXQ7Z2E3 356 aaKnown RBP12.59□□□□□ -0.39
PTPRK-203ENST00000368207 POLNQ7Z5Q5 900 aa12.59□□□□□ -0.39
PTPRK-203ENST00000368207 A8MX80 341 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 MGEA5O60502 916 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 GRK2P25098 689 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 NPY2RP49146 381 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 RASA2Q15283 850 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.39
PTPRK-203ENST00000368207 CDK5RAP1Q96SZ6 601 aaKnown RBP12.58□□□□□ -0.39
PTPRK-203ENST00000368207 KIF17Q9P2E2 1029 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 ARHGAP26Q9UNA1 814 aa12.58□□□□□ -0.39
PTPRK-203ENST00000368207 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 PHGDHO43175 533 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 RBP1P09455 135 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 MMP13P45452 471 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 PLK1P53350 603 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 MRPS5P82675 430 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 LRRC74AQ0VAA2 488 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 AUHQ13825 339 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 GALNTL6Q49A17 601 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 TPGS1Q6ZTW0 290 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 EIF1ADQ8N9N8 165 aaKnown RBP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 APOPT1Q96IL0 206 aa12.58□□□□□ -0.4
PTPRK-203ENST00000368207 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPRK-203ENST00000368207 GIT1Q9Y2X7 761 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms