RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 STK11Q15831 433 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 WLSQ5T9L3 541 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ZNF746Q6NUN9 644 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 C11orf88Q6PI97 169 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 PALB2Q86YC2 1186 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 DSELQ8IZU8 1212 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CLEC4FQ8N1N0 589 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 BEND7Q8N7W2 519 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 RTL3Q8N8U3 475 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 ZFPM2Q8WW38 1151 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 KRT35Q92764 455 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 CEP95Q96GE4 821 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CHID1Q9BWS9 393 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ARHGEF3Q9NR81 526 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 FKBP14Q9NWM8 211 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TRMT6Q9UJA5 497 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 CDH7Q9ULB5 785 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 BAIAP2Q9UQB8 552 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ERVW-1Q9UQF0 538 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 GPR75-ASB3A0A0A6YYF3 556 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ZSCAN5CA6NGD5 496 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 MIF4GDA9UHW6 222 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 DFFAO00273 331 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CCRL2O00421 344 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 AKAP10O43572 662 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ITGAVP06756 1048 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CSF1RP07333 972 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 JUPP14923 745 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ATP6V1B1P15313 513 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ZMYND11Q15326 602 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 LLGL1Q15334 1064 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 GFOD2Q3B7J2 385 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ARMCX4Q5H9R4 360 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 METTL7BQ6UX53 244 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 TERB1Q8NA31 727 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CYGBQ8WWM9 190 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 OR8D1Q8WZ84 308 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 EXT2Q93063 718 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 P2RX5Q93086 422 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ADAM2Q99965 735 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 OSBPL6Q9BZF3 934 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 SLC40A1Q9NP59 571 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 EMILIN3Q9NT22 766 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TMCO1Q9UM00 188 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TDRKHQ9Y2W6 561 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 ASB3Q9Y575 518 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ABCC12Q96J65 1359 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 COL5A2P05997 1499 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 SLIT3O75094 1523 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 A0A1W2PQ72 361 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 EME2A4GXA9 379 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 CBFA2T3O75081 653 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TPH1P17752 444 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 DSG3P32926 999 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 EMC2Q15006 297 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 SGSM1Q2NKQ1 1148 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 GPR141Q7Z602 305 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 RHOT2Q8IXI1 618 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CCDC185Q8N715 623 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 PPHLN1Q8NEY8 458 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 HERVK_113Q902F9 699 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 SENP7Q9BQF6 1050 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 AHSPQ9NZD4 102 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 FOXN3O00409 490 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 SRGAP2O75044 1071 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 MYBP10242 640 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 BCAP31P51572 246 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TRAP1Q12931 704 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 UBE2SQ16763 222 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TMEM53Q6P2H8 277 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 KIAA0408Q6ZU52 694 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CCNYL1Q8N7R7 359 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 TM9SF4Q92544 642 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ERP27Q96DN0 273 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 CMTM5Q96DZ9 223 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ZC3H10Q96K80 434 aaKnown RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 ZDHHC15Q96MV8 337 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 RIT2Q99578 217 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 PDGFDQ9GZP0 370 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 VPS11Q9H270 941 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 JMJD4Q9H9V9 463 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 ZNF224Q9NZL3 707 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 STAP2Q9UGK3 403 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 USP15Q9Y4E8 981 aaPredicted RBP8.83□□□□□ -1
SYNE1-206ENST00000367253 PCDHGA1Q9Y5H4 931 aa8.83□□□□□ -1
SYNE1-206ENST00000367253 RIC1Q4ADV7 1423 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 NRCAMQ92823 1304 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CAPN8A6NHC0 703 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 KPNA4O00629 521 aaPredicted RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 FAM107AO95990 144 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ICAM1P05362 532 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SNAP25P60880 206 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 SULT2A1Q06520 285 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 ILF2Q12905 390 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 CDC16Q13042 620 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 NOMO2Q5JPE7 1267 aa8.82□□□□□ -1
SYNE1-206ENST00000367253 CWF19L1Q69YN2 538 aaKnown RBP8.82□□□□□ -1
SYNE1-206ENST00000367253 ULK3Q6PHR2 472 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms