RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 WARSP23381 471 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PRKG2Q13237 762 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PPP6R3Q5H9R7 873 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FLCNQ8NFG4 579 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CD101Q93033 1021 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TBC1D13Q9NVG8 400 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 EURLQ9NYK6 297 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CBX6O95503 412 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ALDH18A1P54886 795 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 USP10Q14694 798 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ARHGEF6Q15052 776 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 COQ5Q5HYK3 327 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SEPT8Q92599 483 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PRCCQ92733 491 aaPredicted RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM216Q9P0N5 145 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 PROCP04070 461 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KRT19P08727 400 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 NPY5RQ15761 445 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ALG3Q92685 438 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SPATA7Q9P0W8 599 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM247A6NEH6 219 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SDC4P31431 198 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 FSTL1Q12841 308 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 MRNIPQ6NTE8 343 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KBTBD6Q86V97 674 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 QKIQ96PU8 341 aaKnown RBP eCLIP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF408Q9H9D4 720 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 VANGL2Q9ULK5 521 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 SF3A3Q12874 501 aaKnown RBP eCLIP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 GALNT13Q8IUC8 556 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TMCO6Q96DC7 493 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 TNPO3Q9Y5L0 923 aaKnown RBP4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CNTRLQ7Z7A1 2325 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 UGT2B11O75310 529 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 NPR3P17342 541 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 HPCAP84074 193 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 CRTC3Q6UUV7 619 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KCNN1Q92952 543 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 MFSD14AQ96MC6 490 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 LXNQ9BS40 222 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 KRT82Q9NSB4 513 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 COQ6Q9Y2Z9 468 aa4.21□□□□□ -1.74
SYNE2-204ENST00000358025 EPN2O95208 641 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SGPL1O95470 568 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MAGEA6P43360 314 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NDST1P52848 882 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PICALMQ13492 652 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FAM213AQ9BRX8 229 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CATSPERBQ9H7T0 1116 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 OGTO15294 1046 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 AKAP10O43572 662 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GMFBP60983 142 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FASTKD1Q53R41 847 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SLX4IPQ5VYV7 408 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 LRRC47Q8N1G4 583 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GALNT4Q8N4A0 578 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MMP27Q9H306 513 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 JMJD4Q9H9V9 463 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NPR1P16066 1061 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ETFBP38117 255 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GPD2P43304 727 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CCDC117Q8IWD4 279 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GTF3C2Q8WUA4 911 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FAM136AQ96C01 138 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MTERF3Q96E29 417 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 NMUR2Q9GZQ4 415 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 CDH22Q9UJ99 828 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TRIM38O00635 465 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FARP2O94887 1054 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 S100BP04271 92 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 LINGO3P0C6S8 592 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PIK3R1P27986 724 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TGFBR2P37173 567 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 KLK7P49862 253 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 KCNK10P57789 538 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SUSD4Q5VX71 490 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 IYDQ6PHW0 289 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 DHRS4Q9BTZ2 278 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GSTK1Q9Y2Q3 226 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 IRS2Q9Y4H2 1338 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TCRBV9S1A1TA0A576 114 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 GPAT2Q6NUI2 795 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 HEATR4Q86WZ0 1026 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 MRRFQ96E11 262 aaKnown RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 COMMD10Q9Y6G5 202 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 E7ESA3 106 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 OAZ1P54368 228 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 FAM187BQ17R55 369 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 ZC2HC1CQ53FD0 456 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 TIGD7Q6NT04 549 aaPredicted RBP4.2□□□□□ -1.74
SYNE2-204ENST00000358025 KRT74Q7RTS7 529 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 OR7A2PQ8NGA2 310 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L3A6NCW0 530 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L4A6NCW7 530 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 RHDQ02161 417 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L1Q7RTZ2 530 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PREBQ9HCU5 417 aa4.2□□□□□ -1.74
SYNE2-204ENST00000358025 PCDHGB4Q9UN71 923 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms