RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TMEM159Q96B96 161 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 GLT1D1Q96MS3 346 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 DCLK3Q9C098 648 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 EPB41L4BQ9H329 900 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 MAP3K4Q9Y6R4 1608 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 CD44P16070 742 aaKnown RBP15.2■□□□□ 0.02
LMX1B-201ENST00000355497 NPTX2P47972 431 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 TKTL1P51854 596 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 FCGRTP55899 365 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 ITFG1Q8TB96 612 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 BBS4Q96RK4 519 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 VPS51Q9UID3 782 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 SHOC2Q9UQ13 582 aa15.2■□□□□ 0.02
LMX1B-201ENST00000355497 CTDNEP1O95476 244 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 URODP06132 367 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 GP5P40197 560 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 MILR1Q7Z6M3 343 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PROX1Q92786 737 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PRKD2Q9BZL6 878 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PTPRHQ9HD43 1115 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 OSGEPQ9NPF4 335 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 TLR8Q9NR97 1041 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 RBM22Q9NW64 420 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 LRCH1Q9Y2L9 728 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 STX11O75558 287 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ECDO95905 644 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 LTFP02788 710 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ENO2P09104 434 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 UMPSP11172 480 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 STAT5AP42229 794 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 NPY2RP49146 381 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 MARC1Q5VT66 337 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PEG10Q86TG7 708 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 FAM126BQ8IXS8 530 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 DHRSXQ8N5I4 330 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF671Q8TAW3 534 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 MCRS1Q96EZ8 462 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PDCD10Q9BUL8 212 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 POLR1BQ9H9Y6 1135 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 HMG20AQ9NP66 347 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 REREQ9P2R6 1566 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PCDH8O95206 1070 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 TAF13Q15543 124 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 DDI2Q5TDH0 399 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 CAMKK1Q8N5S9 505 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 MYOZ2Q9NPC6 264 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 CISHQ9NSE2 258 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 RGS14O43566 566 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 FGFR2P21802 821 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ME2P23368 584 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 GSTM5P46439 218 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 GPR15P49685 360 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PTENP60484 403 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PTSQ03393 145 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 GIT2Q14161 759 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PAN2Q504Q3 1202 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PRCCQ92733 491 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 PLA2G4CQ9UP65 541 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 SIK3Q9Y2K2 1263 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 TDRKHQ9Y2W6 561 aaKnown RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF7P17097 686 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 SREBF2Q12772 1141 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 XRCC4Q13426 336 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 MZT2BQ6NZ67 158 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF571Q7Z3V5 609 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-201ENST00000355497 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 CLYBLQ8N0X4 340 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 POMKQ9H5K3 350 aa15.19■□□□□ 0.02
LMX1B-201ENST00000355497 OR6B1O95007 311 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 NUDT14O95848 222 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 OR56A5P0C7T3 313 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF280DQ6N043 979 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 EMC1Q8N766 993 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TCP10LQ8TDR4 215 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TBL1YQ9BQ87 522 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CIPCQ9C0C6 399 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TMEM39BQ9GZU3 492 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 PTGES3LE9PB15 166 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 THP07101 528 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 SERPINF2P08697 491 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ZNF24P17028 368 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 ELK3P41970 407 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CLCN3P51790 818 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 PTPN11Q06124 597 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-201ENST00000355497 MOXD1Q6UVY6 613 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CYP20A1Q6UW02 462 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 TRIM39Q9HCM9 518 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 A0A087WXM4 84 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 A0A087X1B8 175 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 VTNP04004 478 aa15.18■□□□□ 0.02
LMX1B-201ENST00000355497 AKAP5P24588 427 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms