RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ACTN2P35609 894 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 MAGEA10P43363 369 aaPredicted RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 KPNA1P52294 538 aaPredicted RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 FAM182AQ5T1J6 154 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 HIBCHQ6NVY1 386 aaPredicted RBP21.17■□□□□ 0.98
TRIM4-202ENST00000354241 CCDC25Q86WR0 208 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 ZNF276Q8N554 614 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 MICAL1Q8TDZ2 1067 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 LGMNQ99538 433 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 ADAM7Q9H2U9 754 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 NEU3Q9UQ49 428 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 IRAK3Q9Y616 596 aa21.17■□□□□ 0.98
TRIM4-202ENST00000354241 E9PAM4 449 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 PPP1R12AO14974 1030 aaPredicted RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 IGLV3-27P01718 113 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 LRG1P02750 347 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 HTR7P34969 479 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 SERPINB6P35237 376 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 FAM193AP78312 1265 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 AP1B1Q10567 949 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 PDK1Q15118 436 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 SHHQ15465 462 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 MANEALQ5VSG8 457 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 HEATR6Q6AI08 1181 aaKnown RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 LILRA6Q6PI73 481 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 C14orf80Q86SX3 495 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 TP53INP2Q8IXH6 220 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 NPWQ8N729 165 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 MRPL43Q8N983 215 aaKnown RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 KREMEN2Q8NCW0 462 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 CCNYQ8ND76 341 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 UBLCP1Q8WVY7 318 aaPredicted RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 BTN2A3PQ96KV6 586 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 ZNF334Q9HCZ1 680 aaPredicted RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 HBS1LQ9Y450 684 aaKnown RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 COCHO43405 550 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 LPXNO60711 386 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 C8AP07357 584 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 CHKAP35790 457 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 MLLT6P55198 1093 aaPredicted RBP21.16■□□□□ 0.98
TRIM4-202ENST00000354241 UBE3AQ05086 875 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 RING1Q06587 406 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 MS4A13Q5J8X5 152 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 CCDC149Q6ZUS6 474 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 RTP4Q96DX8 246 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 C1orf74Q96LT6 269 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 CATSPERBQ9H7T0 1116 aa21.16■□□□□ 0.98
TRIM4-202ENST00000354241 OBSL1O75147 1896 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 C5orf67F2Z3F1 127 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 NDC80O14777 642 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 FGF10O15520 208 aaPredicted RBP21.15■□□□□ 0.98
TRIM4-202ENST00000354241 PPFIA2O75334 1257 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 GLUD1P00367 558 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 CA3P07451 260 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 VAV1P15498 845 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 HOXC13P31276 330 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 HSD17B3P37058 310 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 PPP3CCP48454 512 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 TUBP50607 506 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 NRG1Q02297 640 aaPredicted RBP21.15■□□□□ 0.98
TRIM4-202ENST00000354241 CFAP58Q5T655 872 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 RNASEH2BQ5TBB1 312 aaKnown RBP21.15■□□□□ 0.98
TRIM4-202ENST00000354241 PCGF5Q86SE9 256 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 ABHD8Q96I13 439 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 PRDM12Q9H4Q4 367 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 PAK5Q9P286 719 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 VANGL2Q9ULK5 521 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 NR2E3Q9Y5X4 410 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 RAD54BQ9Y620 910 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 NUP205Q92621 2012 aa21.15■□□□□ 0.98
TRIM4-202ENST00000354241 MTCL1Q9Y4B5 1905 aaKnown RBP21.14■□□□□ 0.98
TRIM4-202ENST00000354241 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 KCNQ1P51787 676 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 PMS2P54278 862 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 BASP1P80723 227 aaKnown RBP21.14■□□□□ 0.98
TRIM4-202ENST00000354241 MORF4L2Q15014 288 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 KLHDC10Q6PID8 442 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 HTR3CQ8WXA8 447 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 PWWP2AQ96N64 755 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 TXLNGYQ9BZA5 131 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 DNAJC17Q9NVM6 304 aaKnown RBP21.14■□□□□ 0.98
TRIM4-202ENST00000354241 ASB3Q9Y575 518 aa21.14■□□□□ 0.98
TRIM4-202ENST00000354241 C2orf78A6NCI8 922 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 GOLGA6BA6NDN3 693 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 GRM6O15303 877 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 AUHQ13825 339 aaKnown RBP21.14■□□□□ 0.97
TRIM4-202ENST00000354241 SLMAPQ14BN4 828 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 PRKD1Q15139 912 aaPredicted RBP21.14■□□□□ 0.97
TRIM4-202ENST00000354241 UAP1Q16222 522 aaPredicted RBP21.14■□□□□ 0.97
TRIM4-202ENST00000354241 RAP1GAP2Q684P5 730 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 NUGGCQ68CJ6 796 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 LRRC31Q6UY01 552 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 PPIL6Q8IXY8 311 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 CCDC110Q8TBZ0 833 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 CELF6Q96J87 481 aaKnown RBP21.14■□□□□ 0.97
TRIM4-202ENST00000354241 MPP6Q9NZW5 540 aa21.14■□□□□ 0.97
TRIM4-202ENST00000354241 SHROOM3Q8TF72 1996 aa21.13■□□□□ 0.97
TRIM4-202ENST00000354241 RB1P06400 928 aa21.13■□□□□ 0.97
TRIM4-202ENST00000354241 IRS1P35568 1242 aa21.13■□□□□ 0.97
TRIM4-202ENST00000354241 TMEM150AQ86TG1 271 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms