RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ARHGEF4Q9NR80 690 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 ABCC13Q9NSE7 274 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 BAIAP2L1Q9UHR4 511 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TRIM33Q9UPN9 1127 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 POLR2AP24928 1970 aaKnown RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 CARNS1A5YM72 827 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 INPPL1O15357 1258 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 AP2A1O95782 977 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 LTFP02788 710 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 SERPINE1P05121 402 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 RARBP10826 455 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 COL6A1P12109 1028 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 COL6A2P12110 1019 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CCNG1P51959 295 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 KPNA1P52294 538 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 DAOAP59103 153 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TMPRSS15P98073 1019 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 GPR162Q16538 588 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TAF1BQ53T94 588 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 DCAF6Q58WW2 860 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CASC4Q6P4E1 433 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 DENND5BQ6ZUT9 1274 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 RASAL3Q86YV0 1011 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 SLC7A14Q8TBB6 771 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 ISL2Q96A47 359 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 OXNAD1Q96HP4 312 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 PWWP2AQ96N64 755 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 HAPLN3Q96S86 360 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 BTBD10Q9BSF8 475 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 FAM167BQ9BTA0 163 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TSPYL2Q9H2G4 693 aaPredicted RBP3.83□□□□□ -1.8
RNF38-203ENST00000353739 DPEP3Q9H4B8 488 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TLE6Q9H808 572 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 NPHS2Q9NP85 383 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 FAM105AQ9NUU6 356 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 GPATCH2LQ9NWQ4 482 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 KANSL3Q9P2N6 904 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 TJP2Q9UDY2 1190 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 PCDHB8Q9UN66 801 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CDY2AQ9Y6F7 541 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 CDY1Q9Y6F8 540 aa3.83□□□□□ -1.8
RNF38-203ENST00000353739 COL4A4P53420 1690 aaPredicted RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 DNAH14Q0VDD8 3507 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 A0A087X1B8 175 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 DCLK1O15075 740 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PEX10O60683 326 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 GRAP2O75791 330 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PDGFRBP09619 1106 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 YBX3P16989 372 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNF38-203ENST00000353739 HOXB8P17481 243 aaPredicted RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 IL4RP24394 825 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CCNCP24863 283 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CDH17Q12864 832 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 TAF5Q15542 800 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 SLC1A5Q15758 541 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 MSS51Q4VC12 460 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 FAM26DQ5JW98 314 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CLEC20AQ6ZU45 233 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PRUNE1Q86TP1 453 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 FAM228AQ86W67 206 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CCDC185Q8N715 623 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 C12orf29Q8N999 325 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CCNYQ8ND76 341 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 STKLD1Q8NE28 680 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CALML6Q8TD86 181 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 RNF34Q969K3 372 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 SENP8Q96LD8 212 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 ZMAT2Q96NC0 199 aaKnown RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 FAM111AQ96PZ2 611 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 UBE2OQ9C0C9 1292 aaKnown RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 SENP6Q9GZR1 1112 aaPredicted RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 XPNPEP3Q9NQH7 507 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 MOCS1Q9NZB8 636 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 DTLQ9NZJ0 730 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 SEPT10Q9P0V9 454 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 ZFATQ9P243 1243 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 TAGLN3Q9UI15 199 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 A0A1W2PPM1 405 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CREB3O43889 395 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 MFSD11O43934 449 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CSDE1O75534 798 aaKnown RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 BPGMP07738 259 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 ESRRAP11474 423 aaPredicted RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 ADRA1DP25100 572 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 MAP2K2P36507 400 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PSEN1P49768 467 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PDE1BQ01064 536 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 GALNT2Q10471 571 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 EFTUD2Q15029 972 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNF38-203ENST00000353739 CFAP157Q5JU67 520 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 PACS1Q6VY07 963 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 CAND1Q86VP6 1230 aaKnown RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 LONP2Q86WA8 852 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 SPATA2LQ8IUW3 424 aaPredicted RBP3.82□□□□□ -1.8
RNF38-203ENST00000353739 ATPAF2Q8N5M1 289 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 FITM2Q8N6M3 262 aa3.82□□□□□ -1.8
RNF38-203ENST00000353739 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms