RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
IFT88-202ENST00000351808 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 NOL3O60936 208 aaKnown RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 CRHR1P34998 444 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 SLC16A2P36021 539 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 QARSP47897 775 aaKnown RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 KRT76Q01546 638 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 GRIK5Q16478 980 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 TTC23LQ6PF05 361 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 SUN5Q8TC36 379 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 SORT1Q99523 831 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 EIF2AK1Q9BQI3 630 aaKnown RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.23
IFT88-202ENST00000351808 PCDHGA11Q9Y5H2 935 aa13.58□□□□□ -0.23
IFT88-202ENST00000351808 TRIM64BA6NI03 449 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 KCNA2P16389 499 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 BMPR1AP36894 532 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 MAMLD1Q13495 774 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 CCDC58Q4VC31 144 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 NHSL2Q5HYW2 709 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 LGSNQ5TDP6 509 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 C4orf22Q6V702 233 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 CHST15Q7LFX5 561 aaPredicted RBP13.58□□□□□ -0.24
IFT88-202ENST00000351808 TPH2Q8IWU9 490 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 FAM20CQ8IXL6 584 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 SLC35B2Q8TB61 432 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 MBOAT7Q96N66 472 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 NOL11Q9H8H0 719 aaKnown RBP13.58□□□□□ -0.24
IFT88-202ENST00000351808 SMYD2Q9NRG4 433 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
IFT88-202ENST00000351808 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 TEX264Q9Y6I9 313 aa13.58□□□□□ -0.24
IFT88-202ENST00000351808 hCG_1818297A0A087WSY0 165 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TEX28O15482 410 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZBTB7AO95365 584 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 C1QAP02745 245 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TSHRP16473 764 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GRK2P25098 689 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 CLK3P49761 638 aaKnown RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 IFITM3Q01628 133 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZBTB49Q6ZSB9 765 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 KCTD8Q6ZWB6 473 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TAS2R42Q7RTR8 314 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 SLC9A9Q8IVB4 645 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 RCN3Q96D15 328 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 MTG1Q9BT17 334 aaPredicted RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 HOXD1Q9GZZ0 328 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GPRC5CQ9NQ84 441 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TBC1D22BQ9NU19 505 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 SERPINB13Q9UIV8 391 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ACOT8O14734 319 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 AKAP10O43572 662 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 SERPINB2P05120 415 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 UBL4AP11441 157 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 MATN1P21941 496 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 PIK3R1P27986 724 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 DSG3P32926 999 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TTKP33981 857 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 DGKDQ16760 1214 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 FAM117BQ6P1L5 589 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZNF354CQ86Y25 554 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TFAP2CQ92754 450 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 EGLN2Q96KS0 407 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 DHX33Q9H6R0 707 aaKnown RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 TRPM3Q9HCF6 1732 aaPredicted RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 PTBP2Q9UKA9 531 aaKnown RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZNF536O15090 1300 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TTC34A8MYJ7 566 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GABBR2O75899 941 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 CLIC3O95833 236 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 CFHP08603 1231 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 CLEC10AQ8IUN9 316 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 TERB1Q8NA31 727 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 SPERTQ8NA61 448 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 POMGNT1Q8WZA1 660 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
IFT88-202ENST00000351808 FEM1CQ96JP0 617 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 ZNF347Q96SE7 839 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 COG4Q9H9E3 785 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 PARVAQ9NVD7 372 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 PI4KBQ9UBF8 816 aa13.57□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8QA0A0J9YX86 632 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 HMX2A2RU54 273 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8OA6NCC3 632 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 CLDN25C9JDP6 229 aa13.56□□□□□ -0.24
IFT88-202ENST00000351808 GOLGA8NF8WBI6 632 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms