RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 ALFQ53S48 1182 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 MEI1Q5TIA1 1274 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 ADGRG2Q8IZP9 1017 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 TTC8Q8TAM2 541 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 TEKT4Q8WW24 435 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 HSPH1Q92598 858 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 BHMTQ93088 406 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 HAPLN3Q96S86 360 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 NDFIP2Q9NV92 336 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 ETNK2Q9NVF9 386 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
ERGIC3-202ENST00000348547 ENC1O14682 589 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 SPOPO43791 374 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 LRIG2O94898 1065 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 LATS1O95835 1130 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 GOT1P17174 413 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 PSMC3P17980 439 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 CTNNA2P26232 953 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 GDI1P31150 447 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 HOXC13P31276 330 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 NAP1L1P55209 391 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 NRG1Q02297 640 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 DPYSQ14117 519 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 LLGL1Q15334 1064 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 CHSY1Q86X52 802 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 DDX42Q86XP3 938 aaKnown RBP eCLIP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 UNC45BQ8IWX7 931 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 RNF34Q969K3 372 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 KLC2Q9H0B6 622 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 DHX35Q9H5Z1 703 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 NOL6Q9H6R4 1146 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 GTSE1Q9NYZ3 720 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 OR12D3Q9UGF7 316 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 SH3BP1Q9Y3L3 701 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
ERGIC3-202ENST00000348547 E9PAM4 449 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 PENKP01210 267 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 ATP1A1P05023 1023 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 SLC2A3P11169 496 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 SLC1A1P43005 524 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 SOX9P48436 509 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 DNA2P51530 1060 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 ZNF211Q13398 564 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 DHCR24Q15392 516 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.33e-8■■■□□ 15.2
ERGIC3-202ENST00000348547 PEX26Q7Z412 305 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 NLRP14Q86W24 1093 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 KATNAL2Q8IYT4 538 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 NPWQ8N729 165 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 PQLC3Q8N755 202 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 ATP6V0D2Q8N8Y2 350 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 PCDH19Q8TAB3 1148 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 C1orf74Q96LT6 269 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 CSPG4P5Q96PW8 444 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 DCLK3Q9C098 648 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 PLK2Q9NYY3 685 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
ERGIC3-202ENST00000348547 TECTAO75443 2155 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 SHROOM3Q8TF72 1996 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 DRGXA6NNA5 263 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 CHADO15335 359 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 PSTPIP1O43586 416 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 KRT1P04264 644 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 PYGMP11217 842 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 CDKN2BP42772 138 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 SLC11A2P49281 568 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 BOLA3Q53S33 107 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 FSCBQ5H9T9 825 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
ERGIC3-202ENST00000348547 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms