RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 HTR7P34969 479 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 AUHQ13825 339 aaKnown RBP27.97■■■□□ 2.07
SSBP4-202ENST00000348495 RFX8Q6ZV50 586 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 PQLC3Q8N755 202 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 SUSD6Q92537 303 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 CD207Q9UJ71 328 aa27.97■■■□□ 2.07
SSBP4-202ENST00000348495 FOSL2P15408 326 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 ADGRF1Q5T601 910 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 RAP1GAP2Q684P5 730 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 ZDHHC14Q8IZN3 488 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 ASB16Q96NS5 453 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 ARHGEF4Q9NR80 690 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 CDH7Q9ULB5 785 aa27.96■■■□□ 2.07
SSBP4-202ENST00000348495 IGLV3-10A0A075B6K4 115 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 GOLGA6L7A0A1B0GV03 622 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 E9PAM4 449 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 SLC6A4P31645 630 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 TPI1P60174 286 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 USP4Q13107 963 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 CLUL1Q15846 466 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 ZNF77Q15935 545 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 LONRF2Q1L5Z9 754 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 FAM78AQ5JUQ0 283 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 CCDC181Q5TID7 509 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 KAZNQ674X7 775 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 SLC9A4Q6AI14 798 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 ZNF572Q7Z3I7 529 aaPredicted RBP27.95■■■□□ 2.07
SSBP4-202ENST00000348495 FAM217AQ8IXS0 508 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 NECTIN4Q96NY8 510 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 POMKQ9H5K3 350 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 LSM7Q9UK45 103 aaKnown RBP27.95■■■□□ 2.07
SSBP4-202ENST00000348495 SH3BP1Q9Y3L3 701 aa27.95■■■□□ 2.07
SSBP4-202ENST00000348495 E2F8A0AVK6 867 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 TJP3O95049 919 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 SIX1Q15475 284 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-202ENST00000348495 CCDC85BQ15834 202 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-202ENST00000348495 FBXL22Q6P050 247 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 BBS12Q6ZW61 710 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 NAP1L3Q99457 506 aaPredicted RBP27.95■■■□□ 2.06
SSBP4-202ENST00000348495 KIF9Q9HAQ2 790 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 TRPV4Q9HBA0 871 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 ZNF510Q9Y2H8 683 aa27.95■■■□□ 2.06
SSBP4-202ENST00000348495 DOCK8Q8NF50 2099 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 TACR2P21452 398 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 PAFAH1B1P43034 410 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 C5orf22Q49AR2 442 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 CHSY1Q86X52 802 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 SMARCD2Q92925 531 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 UBE2ZQ9H832 354 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-202ENST00000348495 PRDM16Q9HAZ2 1276 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 PPARGC1AQ9UBK2 798 aaKnown RBP27.94■■■□□ 2.06
SSBP4-202ENST00000348495 VANGL2Q9ULK5 521 aa27.94■■■□□ 2.06
SSBP4-202ENST00000348495 USP15Q9Y4E8 981 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-202ENST00000348495 DRGXA6NNA5 263 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 H3BQ06 376 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-202ENST00000348495 GFRA2O00451 464 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 CST8O60676 142 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 AMPD1P23109 780 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 TFDP2Q14188 446 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 RFX6Q8HWS3 928 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 CELF5Q8N6W0 485 aaKnown RBP27.93■■■□□ 2.06
SSBP4-202ENST00000348495 TBC1D31Q96DN5 1066 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 MYEOVQ96EZ4 313 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 MYADMQ96S97 322 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 MAK16Q9BXY0 300 aaKnown RBP27.93■■■□□ 2.06
SSBP4-202ENST00000348495 NR2E1Q9Y466 385 aa27.93■■■□□ 2.06
SSBP4-202ENST00000348495 SCAMP3O14828 347 aaKnown RBP27.92■■■□□ 2.06
SSBP4-202ENST00000348495 DCLK1O15075 740 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 EPHB2P29323 1055 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 CKAP4Q07065 602 aaKnown RBP27.92■■■□□ 2.06
SSBP4-202ENST00000348495 BBS7Q8IWZ6 715 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 PLD5Q8N7P1 536 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 KIAA1958Q8N8K9 716 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 IGSF8Q969P0 613 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 RSPRY1Q96DX4 576 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 RFWD3Q6PCD5 774 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 LRRC31Q6UY01 552 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 ADAT2Q7Z6V5 191 aaKnown RBP27.92■■■□□ 2.06
SSBP4-202ENST00000348495 LRRC3BQ96PB8 259 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 DDX50Q9BQ39 737 aaKnown RBP27.92■■■□□ 2.06
SSBP4-202ENST00000348495 ETNK2Q9NVF9 386 aa27.92■■■□□ 2.06
SSBP4-202ENST00000348495 F5H5T6 163 aa27.91■■■□□ 2.06
SSBP4-202ENST00000348495 ERCC2P18074 760 aa27.91■■■□□ 2.06
SSBP4-202ENST00000348495 FCARP24071 287 aa27.91■■■□□ 2.06
SSBP4-202ENST00000348495 PRICKLE1Q96MT3 831 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-202ENST00000348495 GRXCR2A6NFK2 248 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 APOL1O14791 398 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 FGF10O15520 208 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-202ENST00000348495 DAPK3O43293 454 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 KCNA5P22460 613 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 IRAK1P51617 712 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 DYNLT1P63172 113 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 NCBP2-AS2Q69YL0 99 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 RWDD4Q6NW29 188 aaKnown RBP27.9■■■□□ 2.06
SSBP4-202ENST00000348495 LGI2Q8N0V4 545 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 CPXM2Q8N436 756 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 TTC16Q8NEE8 873 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-202ENST00000348495 MAIP1Q8WWC4 291 aa27.9■■■□□ 2.06
SSBP4-202ENST00000348495 AP1M1Q9BXS5 423 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms