RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 HSP90B2PQ58FF3 399 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 RNASEH2BQ5TBB1 312 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 RWDD4Q6NW29 188 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 BTN2A3PQ96KV6 586 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 NACA2Q9H009 215 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 ADAM7Q9H2U9 754 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 CCSER2Q9H7U1 834 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 ENTPD7Q9NQZ7 604 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 DNMT3LQ9UJW3 386 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 HBS1LQ9Y450 684 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 ZNF840PA6NDX5 716 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 STK10O94804 968 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 SRGAP2BP0DMP2 458 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 MX2P20592 715 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 ATP5C1P36542 298 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 GGCXP38435 758 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 HECTD3Q5T447 861 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 MANEALQ5VSG8 457 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 KLHDC10Q6PID8 442 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 B4GALNT4Q76KP1 1039 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 HOOK3Q86VS8 718 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 CCDC25Q86WR0 208 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 PPIL6Q8IXY8 311 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 ZCCHC9Q8N567 271 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 DPF3Q92784 378 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 TCF25Q9BQ70 676 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 BRD8Q9H0E9 1235 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 MED4Q9NPJ6 270 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 HS3ST4Q9Y661 456 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 TGM5O43548 720 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 IGLV3-27P01718 113 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 TUBP50607 506 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 MLLT6P55198 1093 aaPredicted RBP19.24■□□□□ 0.67
PTN-201ENST00000348225 FAM193AP78312 1265 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 UBE3AQ05086 875 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 PRKD1Q15139 912 aaPredicted RBP19.24■□□□□ 0.67
PTN-201ENST00000348225 NUGGCQ68CJ6 796 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 CCDC149Q6ZUS6 474 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 IQCKQ8N0W5 287 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 HTR3CQ8WXA8 447 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 ASB3Q9Y575 518 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 IRAK3Q9Y616 596 aa19.24■□□□□ 0.67
PTN-201ENST00000348225 LINC01553A4QN01 128 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 E9PAM4 449 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 UAP1Q16222 522 aaPredicted RBP19.23■□□□□ 0.67
PTN-201ENST00000348225 LRIG3Q6UXM1 1119 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 LRRC31Q6UY01 552 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 TRMT10CQ7L0Y3 403 aaKnown RBP19.23■□□□□ 0.67
PTN-201ENST00000348225 DNAJB7Q7Z6W7 309 aaPredicted RBP19.23■□□□□ 0.67
PTN-201ENST00000348225 GOLGA6L1Q8N7Z2 621 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 CCNYQ8ND76 341 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 ZIM3Q96PE6 472 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 KLHL5Q96PQ7 755 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 PABPC3Q9H361 631 aaKnown RBP19.23■□□□□ 0.67
PTN-201ENST00000348225 NEU3Q9UQ49 428 aa19.23■□□□□ 0.67
PTN-201ENST00000348225 FARP1Q9Y4F1 1045 aaPredicted RBP19.23■□□□□ 0.67
PTN-201ENST00000348225 C5orf60A6NFR6 353 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 OPA1O60313 960 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 LPXNO60711 386 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 GCATO75600 419 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 CHKAP35790 457 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 BASP1P80723 227 aaKnown RBP19.22■□□□□ 0.67
PTN-201ENST00000348225 AP1B1Q10567 949 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 PIK3R6Q5UE93 754 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 LZTR1Q8N653 840 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 KLC2Q9H0B6 622 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 PRDM12Q9H4Q4 367 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
PTN-201ENST00000348225 DONSONQ9NYP3 566 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 XPO7Q9UIA9 1087 aaKnown RBP19.22■□□□□ 0.67
PTN-201ENST00000348225 PLAAQ9Y263 795 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 CLUHO75153 1309 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 SPDYE4A6NLX3 237 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 LRG1P02750 347 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 HMBSP08397 361 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 COG7P83436 770 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 GALNT2Q10471 571 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 DENND2CQ68D51 928 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 NPWQ8N729 165 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 POF1BQ8WVV4 589 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 CPT1BQ92523 772 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 PRCCQ92733 491 aaPredicted RBP19.22■□□□□ 0.67
PTN-201ENST00000348225 LGMNQ99538 433 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 TLR9Q9NR96 1032 aa19.22■□□□□ 0.67
PTN-201ENST00000348225 C5orf67F2Z3F1 127 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 MTSS1O43312 755 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 RB1P06400 928 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 VAV1P15498 845 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 NRLP54845 237 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 ERVFC1P60507 584 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 PABPC1LQ4VXU2 614 aaKnown RBP19.21■□□□□ 0.67
PTN-201ENST00000348225 MS4A13Q5J8X5 152 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 PLPP4Q5VZY2 271 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 LILRA6Q6PI73 481 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 ARHGEF18Q6ZSZ5 1173 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 RELL1Q8IUW5 271 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 NAT8LQ8N9F0 302 aa19.21■□□□□ 0.67
PTN-201ENST00000348225 SPPL3Q8TCT6 385 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms