RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ASB7Q9H672 318 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 TMBIM4Q9HC24 238 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 DLGAP2Q9P1A6 1054 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 FAM153AQ9UHL3 310 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 HAO1Q9UJM8 370 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 GUCY1B2O75343 617 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 TKTP29401 623 aaKnown RBP23.61■■□□□ 1.37
NPAS3-201ENST00000346562 AGKQ53H12 422 aa23.61■■□□□ 1.37
NPAS3-201ENST00000346562 BGNP21810 368 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 PSEN2P49810 448 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 NFIAQ12857 509 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 SETMARQ53H47 684 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 HNRNPLLQ8WVV9 542 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 PACSIN1Q9BY11 444 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 RRAGCQ9HB90 399 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 PAIP2BQ9ULR5 123 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 UNC13BO14795 1591 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 MROH7Q68CQ1 1323 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 TYMPP19971 482 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 AKAP5P24588 427 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 CREMQ03060 361 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 DOK6Q6PKX4 331 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 TRPC4APQ8TEL6 797 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 DNAJC1Q96KC8 554 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 SLITRK2Q9H156 845 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 E7ENQ6 273 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 VIL1P09327 827 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 NFIL3Q16649 462 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 FAM83AQ86UY5 434 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 SEMA6BQ9H3T3 888 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 IGFLR1Q9H665 355 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 NDUFA13Q9P0J0 144 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 NQO1P15559 274 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 MLH1P40692 756 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 ERVK-24P63145 666 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 INTS5Q6P9B9 1019 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 C11orf88Q6PI97 169 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 ARHGEF3Q9NR81 526 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 UBA2Q9UBT2 640 aaPredicted RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 TFR2Q9UP52 801 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 ATP5BP06576 529 aaKnown RBP23.6■■□□□ 1.37
NPAS3-201ENST00000346562 GPR15P49685 360 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 NAB1Q13506 487 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 USP45Q70EL2 814 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 TMEM132CQ8N3T6 1108 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 SPPL2AQ8TCT8 520 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 HTR3CQ8WXA8 447 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 KIAA1683Q9H0B3 1180 aa23.6■■□□□ 1.37
NPAS3-201ENST00000346562 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 HSMCR30P0CW71 290 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ZNF135P52742 658 aaPredicted RBP23.59■■□□□ 1.37
NPAS3-201ENST00000346562 RASA2Q15283 850 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 TBCELQ5QJ74 424 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 EID3Q8N140 333 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 TECPR2O15040 1411 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 SEC22BO75396 215 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 GHRP10912 638 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ZNF24P17028 368 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ALDH5A1P51649 535 aaPredicted RBP23.59■■□□□ 1.37
NPAS3-201ENST00000346562 SLC39A12Q504Y0 691 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 A1CFQ9NQ94 594 aaKnown RBP23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ARHGAP28Q9P2N2 729 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 SMIM31A0A1B0GVY4 71 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 IL5RAQ01344 420 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 MILR1Q7Z6M3 343 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 NOD2Q9HC29 1040 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 PRKAG3Q9UGI9 489 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ENTPD4Q9Y227 616 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 PAGE2BQ5JRK9 111 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 SPACA7Q96KW9 195 aa23.59■■□□□ 1.37
NPAS3-201ENST00000346562 ACAT1P24752 427 aaKnown RBP23.58■■□□□ 1.37
NPAS3-201ENST00000346562 SLC1A6P48664 564 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 XRCC4Q13426 336 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 FNDC5Q8NAU1 212 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 UTP15Q8TED0 518 aaKnown RBP23.58■■□□□ 1.37
NPAS3-201ENST00000346562 OLFM1Q99784 485 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 NFASCO94856 1347 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 A0A087X1B8 175 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 WDR27A2RRH5 827 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 CCDC154A6NI56 674 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 PAEPP09466 180 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 PAICSP22234 425 aaKnown RBP23.58■■□□□ 1.37
NPAS3-201ENST00000346562 ARMC12Q5T9G4 340 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 MCOLN2Q8IZK6 566 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 TMEM86AQ8N2M4 240 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 SUSD6Q92537 303 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 QRFPRQ96P65 431 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 HMX1Q9NP08 348 aaPredicted RBP23.58■■□□□ 1.37
NPAS3-201ENST00000346562 PCDHA3Q9Y5H8 950 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 TEX28O15482 410 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 TBC1D12O60347 775 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 SNX30Q5VWJ9 437 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 NIPA1Q7RTP0 329 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 SVOPQ8N4V2 548 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 CES2O00748 559 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 SPTLC1O15269 473 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 RGS14O43566 566 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 INAQ16352 499 aa23.58■■□□□ 1.37
NPAS3-201ENST00000346562 ABHD16BQ9H3Z7 469 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms