RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IQCB1Q15051 598 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 ZSCAN23Q3MJ62 389 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC25A52Q3SY17 297 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 FNDC3BQ53EP0 1204 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 NADSYN1Q6IA69 706 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 LRRC31Q6UY01 552 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 ARCQ7LC44 396 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 APTXQ7Z2E3 356 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 KIAA2013Q8IYS2 634 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 MYO18AQ92614 2054 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 ZC3H10Q96K80 434 aaKnown RBP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 ADAM22Q9P0K1 906 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 A0A1B0GTH6 734 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 LUC7L3O95232 432 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 ASLP04424 464 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 EPHX1P07099 455 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 SDHBP21912 280 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 MMP8P22894 467 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 NNMTP40261 264 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 UBASH3AP57075 661 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 RPS24P62847 133 aaKnown RBP16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 PITX1P78337 314 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 LMNB2Q03252 620 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC12A1Q13621 1099 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 ZNF234Q14588 700 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 MBLAC2Q68D91 279 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 LRSAM1Q6UWE0 723 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC36A4Q6YBV0 504 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 LPCAT2Q7L5N7 544 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 KBTBD6Q86V97 674 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 DCLK2Q8N568 766 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 IQCDQ96DY2 449 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 RPRD1AQ96P16 312 aaPredicted RBP16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 ACOX2Q99424 681 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 NPY6RQ99463 290 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 AGPAT1Q99943 283 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 EDEM3Q9BZQ6 932 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 CLEC4EQ9ULY5 219 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 PCDHGA5Q9Y5G8 931 aa16.31■□□□□ 0.2
TSPAN4-201ENST00000346501 A0A1B0GVM2 712 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 ANTXRLA6NF34 631 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 TCAF2A6NFQ2 919 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 ACADMP11310 421 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 HOXC13P31276 330 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SDC4P31431 198 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 RDXP35241 583 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 FANCCQ00597 558 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SPEM2Q0P670 501 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 ASIC2Q16515 512 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 CLEC16AQ2KHT3 1053 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 ARL13BQ3SXY8 428 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 PLK5Q496M5 336 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SFMBT2Q5VUG0 894 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 KIAA1324Q6UXG2 1013 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 CFAP52Q8N1V2 620 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 C12orf50Q8NA57 414 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC30A5Q8TAD4 765 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 PGAP3Q96FM1 320 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 PRICKLE1Q96MT3 831 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 TKTL2Q9H0I9 626 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SIK2Q9H0K1 926 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 FBRSQ9HAH7 460 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 METTL5Q9NRN9 209 aaKnown RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 INVSQ9Y283 1065 aa16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 EP300Q09472 2414 aaPredicted RBP16.3■□□□□ 0.2
TSPAN4-201ENST00000346501 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 A0A1W2PQF6 199 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 FAM170AA1A519 330 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 PRR5-ARHGAP8B1AHC4 643 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 AP5Z1O43299 807 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 KRT3P12035 628 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 PDGFRAP16234 1089 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 CHRNB2P17787 502 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 GABRG2P18507 467 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 P2RY2P41231 377 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 DPP6P42658 865 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 IL12RB1P42701 662 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 CXCR3P49682 368 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 SGSHP51688 502 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 ARHGAP8P85298 464 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 CENPCQ03188 943 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 ZNF177Q13360 481 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 EIF4EBP2Q13542 120 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 C2CD6Q53TS8 623 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 OLIG1Q8TAK6 271 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 PRCCQ92733 491 aaPredicted RBP16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 TBCBQ99426 244 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 PRDM16Q9HAZ2 1276 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 CALCOCO1Q9P1Z2 691 aa16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 XPO7Q9UIA9 1087 aaKnown RBP16.29■□□□□ 0.2
TSPAN4-201ENST00000346501 RAD54BQ9Y620 910 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms