RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 IKBKGQ9Y6K9 419 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 NCAM2O15394 837 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 IRAK2O43187 625 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MYCP01106 439 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 GATMP50440 423 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SLC18A1P54219 525 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SARNPP82979 210 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CDK16Q00536 496 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 IFT88Q13099 833 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 NFE2Q16621 373 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 C6orf89Q6UWU4 347 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SCD5Q86SK9 330 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 MPP5Q8N3R9 675 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 DENND1AQ8TEH3 1009 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SLC44A1Q8WWI5 657 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 CABS1Q96KC9 395 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 EBNA1BP2Q99848 306 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 UNC93B1Q9H1C4 597 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 SFMBT1Q9UHJ3 866 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 ADAM28Q9UKQ2 775 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 TRIM17Q9Y577 477 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 VWA8A3KMH1 1905 aa14.53□□□□□ -0.08
CDK5RAP1-202ENST00000346416 DNM1LO00429 736 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SYN3O14994 580 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 TYROBPO43914 113 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 C1QAP02745 245 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 INHBAP08476 426 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CA4P22748 312 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PSMB4P28070 264 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 RPA3P35244 121 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PPIDQ08752 370 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 DDR2Q16832 855 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PARP6Q2NL67 630 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 FAM171A1Q5VUB5 890 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SDHAF4Q5VUM1 108 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 UNC5AQ6ZN44 842 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PID1Q7Z2X4 250 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PIGWQ7Z7B1 504 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 STKLD1Q8NE28 680 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CASP10Q92851 521 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 FUBP3Q96I24 572 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CASD1Q96PB1 797 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PGLYRP2Q96PD5 576 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PAIP2Q9BPZ3 127 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 TRIM56Q9BRZ2 755 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SEZ6LQ9BYH1 1024 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 OSBPL2Q9H1P3 480 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SMOC2Q9H3U7 446 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 NMUR1Q9HB89 426 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 ARHGEF38Q9NXL2 777 aa14.52□□□□□ -0.09
CDK5RAP1-202ENST00000346416 TRDMT1O14717 391 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 MSI1O43347 362 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 ASMTLO95671 621 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 APOEP02649 317 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SERPINB6P35237 376 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CORO7P57737 925 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 HTRA3P83110 453 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 IL9RQ01113 521 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CTXN3Q4LDR2 81 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CTAGE3PQ8IX95 158 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 B3GALT6Q96L58 329 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 MAGEB18Q96M61 343 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 TGS1Q96RS0 853 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 GPR62Q9BZJ7 368 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 NSRP1Q9H0G5 558 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SIK2Q9H0K1 926 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 EIF2B3Q9NR50 452 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 FGFR1OP2Q9NVK5 253 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 KLHL8Q9P2G9 620 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 NUDT5Q9UKK9 219 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 ATXN2Q99700 1313 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 IQANK1A0A1B0GTG1 560 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 A0A1W2PQH9 124 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 KIAA0754O94854 1291 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 GSTA2P09210 222 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SRGAP2BP0DMP2 458 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 MLNP12872 115 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 MX2P20592 715 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PRKCHP24723 683 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PTPN3P26045 913 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 CYP2C18P33260 490 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 GPR15P49685 360 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 GALNT2Q10471 571 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SF3A3Q12874 501 aaKnown RBP eCLIP14.51□□□□□ -0.095e-6■□□□□ 8.8
CDK5RAP1-202ENST00000346416 BRMS1LQ5PSV4 323 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 NUGGCQ68CJ6 796 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 LRRC6Q86X45 466 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 NUP93Q8N1F7 819 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 PPM1NQ8N819 430 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 DEPDC1BQ8WUY9 529 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SEPT8Q92599 483 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 HDAC11Q96DB2 347 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SSU72Q9NP77 194 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 SAMD15Q9P1V8 674 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 IGSF9Q9P2J2 1179 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 HCSTQ9UBK5 93 aa14.51□□□□□ -0.09
CDK5RAP1-202ENST00000346416 LRFN2Q9ULH4 789 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms