RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 IRX4P78413 519 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 TYRO3Q06418 890 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 TAF3Q5VWG9 929 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 PEAR1Q5VY43 1037 aaPredicted RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 OR6B2Q6IFH4 312 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 SDE2Q6IQ49 451 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 LPCAT2Q7L5N7 544 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 APTXQ7Z2E3 356 aaKnown RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 NOP9Q86U38 636 aaKnown RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 ADIPOR2Q86V24 386 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 SLC41A1Q8IVJ1 513 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 TRIM62Q9BVG3 475 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 CIPCQ9C0C6 399 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 ABCB8Q9NUT2 735 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 ASNSD1Q9NWL6 643 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 LIMA1Q9UHB6 759 aaKnown RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 NYNRINQ9P2P1 1898 aaKnown RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 CDX4O14627 284 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 HSF2BPO75031 334 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 GLI1P08151 1106 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 CD70P32970 193 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 COPAP53621 1224 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 JAM2P57087 298 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 SLC6A3Q01959 620 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 RPL6Q02878 288 aaKnown RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 EIF4HQ15056 248 aaKnown RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 MS4A13Q5J8X5 152 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 EFHC1Q5JVL4 640 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 MPP7Q5T2T1 576 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 OTUD1Q5VV17 481 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 CHST9Q7L1S5 443 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 SLC26A9Q7LBE3 791 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 CFAP52Q8N1V2 620 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 EPS8L1Q8TE68 723 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 CYB5D2Q8WUJ1 264 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 UCMAQ8WVF2 138 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 NOX5Q96PH1 765 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 IRX2Q9BZI1 471 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 FSCN3Q9NQT6 498 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 FAM207AQ9NSI2 230 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-202ENST00000344726 STIM2Q9P246 746 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 GGA2Q9UJY4 613 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 PILRBQ9UKJ0 227 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 DOCK4Q8N1I0 1966 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 PCDH15Q96QU1 1955 aa14.96□□□□□ -0.01
HMGN3-202ENST00000344726 ASCC3Q8N3C0 2202 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 SYNJ2BP-COX16A0A087WUM0 186 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 C4orf47A7E2U8 309 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 KHNYNO15037 678 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 DAB1O75553 588 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 GFPT2O94808 682 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 MMEP08473 750 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 ADRB1P08588 477 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 PABPC1P11940 636 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 HLA-EP13747 358 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 POLR2FP61218 127 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 PTPRNQ16849 979 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 C2CD6Q53TS8 623 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 FKBP15Q5T1M5 1219 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 RAP1GAP2Q684P5 730 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 KIAA1324Q6UXG2 1013 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 AOPEPQ8N6M6 819 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 ZNF366Q8N895 744 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 HJURPQ8NCD3 748 aaPredicted RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 TMEM35BQ8NCS4 154 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 WFIKKN2Q8TEU8 576 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 SLC20A1Q8WUM9 679 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 FAM204AQ9H8W3 233 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 NLRC4Q9NPP4 1024 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 DDIT4Q9NX09 232 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 COX16Q9P0S2 106 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 NOCTQ9UK39 431 aaKnown RBP14.95□□□□□ -0.02
HMGN3-202ENST00000344726 CACNA1EQ15878 2313 aa14.95□□□□□ -0.02
HMGN3-202ENST00000344726 LRRC10BA6NIK2 292 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 LGALS16A8MUM7 142 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 KCNU1A8MYU2 1149 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 NPC1O15118 1278 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 AP5Z1O43299 807 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 APOEP02649 317 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 ATP1A3P13637 1013 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 CHRNB2P17787 502 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 TFE3P19532 575 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 TACR2P21452 398 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 GABRB2P47870 512 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 CDK17Q00537 523 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 LMAN2Q12907 356 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 BYSLQ13895 437 aaKnown RBP14.94□□□□□ -0.02
HMGN3-202ENST00000344726 SYCP1Q15431 976 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 ANO6Q4KMQ2 910 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 TRIM61Q5EBN2 209 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 FSCBQ5H9T9 825 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 SPDYCQ5MJ68 293 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 MBLAC2Q68D91 279 aa14.94□□□□□ -0.02
HMGN3-202ENST00000344726 MMS22LQ6ZRQ5 1243 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms