RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HYAL3O43820 417 aaPredicted RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 DFNA5O60443 496 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 ACSL4O60488 711 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 MOCS2O96007 188 aaPredicted RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 ATP5BP06576 529 aaKnown RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 EPHX1P07099 455 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 SLC9A1P19634 815 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 TPMTP51580 245 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 EXOC3L4Q17RC7 722 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 CHST9Q7L1S5 443 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 NAXDQ8IW45 347 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 MLKLQ8NB16 471 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 OR2T3Q8NH03 318 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 CYB5D2Q8WUJ1 264 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 ZNF606Q8WXB4 792 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 AZIN2Q96A70 460 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 FAM81BQ96LP2 452 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 DDX50Q9BQ39 737 aaKnown RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 CD93Q9NPY3 652 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 FSCN3Q9NQT6 498 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 NAALADL1Q9UQQ1 740 aa12.9□□□□□ -0.34
SGCA-202ENST00000344627 SPAARA0A1B0GVQ0 90 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 SRRM3A6NNA2 597 aaPredicted RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 FLRT2O43155 660 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 SART1O43290 800 aaKnown RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 HLA-EP13747 358 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 PRKCHP24723 683 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 MATKP42679 507 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 GPD2P43304 727 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 SGSHP51688 502 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 APBA1Q02410 837 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 GRIK2Q13002 908 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 CAMK2GQ13555 558 aaPredicted RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 TEAD4Q15561 434 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 TRIM65Q6PJ69 517 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 AHI1Q8N157 1196 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
SGCA-202ENST00000344627 KDM1BQ8NB78 822 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 MED15Q96RN5 788 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 GPR174Q9BXC1 333 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 MKRN2Q9H000 416 aaKnown RBP12.89□□□□□ -0.35
SGCA-202ENST00000344627 ACP6Q9NPH0 428 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
SGCA-202ENST00000344627 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 E5RJQ4 531 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 SH3BP5O60239 455 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 PABPC1P11940 636 aaKnown RBP12.88□□□□□ -0.35
SGCA-202ENST00000344627 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
SGCA-202ENST00000344627 POLR2EP19388 210 aaKnown RBP12.88□□□□□ -0.35
SGCA-202ENST00000344627 HLA-FP30511 346 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 COPAP53621 1224 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 RING1Q06587 406 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 INAVAQ3KP66 663 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 PIK3R6Q5UE93 754 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 DCAF12L1Q5VU92 463 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 KIAA0907Q7Z7F0 614 aaPredicted RBP12.88□□□□□ -0.35
SGCA-202ENST00000344627 FAM124AQ86V42 546 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 PASD1Q8IV76 773 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 CARNMT1Q8N4J0 409 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 DQX1Q8TE96 717 aaKnown RBP12.88□□□□□ -0.35
SGCA-202ENST00000344627 RNF34Q969K3 372 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 TRIM62Q9BVG3 475 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 MIR1-1HGQ9H1L0 117 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 SGK2Q9HBY8 427 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 TLR6Q9Y2C9 796 aa12.88□□□□□ -0.35
SGCA-202ENST00000344627 CEP295Q9C0D2 2601 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 ASPMQ8IZT6 3477 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 E9PAM4 449 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 IGLV3-27P01718 113 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 APOEP02649 317 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 FYNP06241 537 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 CDK4P11802 303 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 SPINK2P20155 84 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 PON1P27169 355 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 MAOBP27338 520 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 SLC6A4P31645 630 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 KRT9P35527 623 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 PTK2Q05397 1052 aa12.87□□□□□ -0.35
SGCA-202ENST00000344627 TTC31Q49AM3 519 aaPredicted RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
SGCA-202ENST00000344627 SYPL2Q5VXT5 272 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms