RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 STKLD1Q8NE28 680 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 P2RY11Q96G91 374 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 SGSM3Q96HU1 749 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 MAGEB18Q96M61 343 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 SPATA13Q96N96 652 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 FERMT1Q9BQL6 677 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 CEP41Q9BYV8 373 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 TRABDQ9H4I3 376 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 PRDM12Q9H4Q4 367 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 OR12D3Q9UGF7 316 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 LRFN2Q9ULH4 789 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 TNFRSF10BO14763 440 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 SPAG7O75391 227 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 SCTRP47872 440 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 BTBD8Q5XKL5 378 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 SEPT8Q92599 483 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 CFAP36Q96G28 342 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 B3GALT6Q96L58 329 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 PGLYRP2Q96PD5 576 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 EPAS1Q99814 870 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 ELAC1Q9H777 363 aaKnown RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 OAS1P00973 400 aaKnown RBP19.15■□□□□ 0.66
HOXA9-201ENST00000343483 TSHRP16473 764 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 IL9RQ01113 521 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 FAM171A1Q5VUB5 890 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 SDHAF4Q5VUM1 108 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 PDZD4Q76G19 769 aaPredicted RBP19.15■□□□□ 0.66
HOXA9-201ENST00000343483 SMC6Q96SB8 1091 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 PAFAH2Q99487 392 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 ABCC13Q9NSE7 274 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 SENP1Q9P0U3 644 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 USP15Q9Y4E8 981 aaPredicted RBP19.15■□□□□ 0.66
HOXA9-201ENST00000343483 PITPNM1O00562 1244 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 EPHB2P29323 1055 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 HCAR3P49019 387 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 GLUD2P49448 558 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 PGFP49763 221 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 ZKSCAN8Q15776 578 aaPredicted RBP19.15■□□□□ 0.66
HOXA9-201ENST00000343483 CTXN3Q4LDR2 81 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 MCUQ8NE86 351 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 CASD1Q96PB1 797 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 PAIP2Q9BPZ3 127 aaKnown RBP19.15■□□□□ 0.66
HOXA9-201ENST00000343483 SEZ6LQ9BYH1 1024 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 KIF9Q9HAQ2 790 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 HCSTQ9UBK5 93 aa19.15■□□□□ 0.66
HOXA9-201ENST00000343483 TCRBV9S1A1TA0A576 114 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 SYN3O14994 580 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 TPSB2P20231 275 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 SEMA5AQ13591 1074 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 RASA2Q15283 850 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 TPSAB1Q15661 275 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 NFE2Q16621 373 aaPredicted RBP19.14■□□□□ 0.65
HOXA9-201ENST00000343483 DDR2Q16832 855 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 TCTN1Q2MV58 587 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 TRPM8Q7Z2W7 1104 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 NPWQ8N729 165 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 COLGALT1Q8NBJ5 622 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 CYTH2Q99418 400 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 FETUBQ9UGM5 382 aa19.14■□□□□ 0.65
HOXA9-201ENST00000343483 ZC3H7BQ9UGR2 993 aaKnown RBP19.14■□□□□ 0.65
HOXA9-201ENST00000343483 KCNK1O00180 336 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 PRPF4O43172 522 aaKnown RBP eCLIP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 MSI1O43347 362 aaKnown RBP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 OPHN1O60890 802 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 LRIG2O94898 1065 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 MSH2P43246 934 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 GJA8P48165 433 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 GPR15P49685 360 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 ATN1P54259 1190 aaPredicted RBP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 WDR4P57081 412 aaKnown RBP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 BEND5Q7L4P6 421 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 C4orf33Q8N1A6 199 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SCLYQ96I15 445 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 GPR62Q9BZJ7 368 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SFMBT1Q9UHJ3 866 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 NUDT5Q9UKK9 219 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SMG5Q9UPR3 1016 aaKnown RBP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 IRAK2O43187 625 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SUN1O94901 812 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 IGLV3-25P01717 112 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SRGAP2BP0DMP2 458 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 FDFT1P37268 417 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 GRIA1P42261 906 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 ARPP19P56211 112 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 ZNF534Q76KX8 674 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SPATA21Q7Z572 469 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SCD5Q86SK9 330 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 DIS3LQ8TF46 1054 aaKnown RBP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 FUBP3Q96I24 572 aaKnown RBP eCLIP19.13■□□□□ 0.65
HOXA9-201ENST00000343483 SIK2Q9H0K1 926 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 MAD1L1Q9Y6D9 718 aa19.13■□□□□ 0.65
HOXA9-201ENST00000343483 NLRC5Q86WI3 1866 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 A0A1W2PQH9 124 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 SPAG6O75602 509 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 ALDH2P05091 517 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 FOXN2P32314 431 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 PBX3P40426 434 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 SLC11A1P49279 550 aa19.12■□□□□ 0.65
HOXA9-201ENST00000343483 WASHC5Q12768 1159 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms