RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NUP107P57740 925 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SLC10A2Q12908 348 aaPredicted RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MTA1Q13330 715 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SEMA5AQ13591 1074 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CEACAM7Q14002 265 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 EMC2Q15006 297 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PDK2Q15119 407 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SLC9B1Q4ZJI4 515 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF394Q53GI3 561 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 ISLR2Q6UXK2 745 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 RP9Q8TA86 221 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PRPF31Q8WWY3 499 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 FERMT1Q9BQL6 677 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 TARS2Q9BW92 718 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 DBNDD1Q9H9R9 158 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PRDM16Q9HAZ2 1276 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MTMR10Q9NXD2 777 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SSC5DA1L4H1 1573 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 FAM155AB1AL88 458 aaPredicted RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 G3V3G9 751 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 H3BNH8 94 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 APOL1O14791 398 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 WDR46O15213 610 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 ADCY6O43306 1168 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 KLHL41O60662 606 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CBFA2T3O75081 653 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 BMP10O95393 424 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 H6PDO95479 791 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MLNP12872 115 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MX2P20592 715 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 COG7P83436 770 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PFKPQ01813 784 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CCDC153Q494R4 210 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 DCAF8Q5TAQ9 597 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 LPCAT2Q7L5N7 544 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SNX32Q86XE0 403 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CDKL3Q8IVW4 592 aaPredicted RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SLC7A14Q8TBB6 771 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 HM13Q8TCT9 377 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MAPK15Q8TD08 544 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 SNRNP27Q8WVK2 155 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 OSBPL11Q9BXB4 747 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 OSBPL6Q9BZF3 934 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MTMR12Q9C0I1 747 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 XYLT2Q9H1B5 865 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PORCNQ9H237 461 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 TMEM216Q9P0N5 145 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 TUBGCP4Q9UGJ1 667 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 CDH7Q9ULB5 785 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PAIP2BQ9ULR5 123 aaKnown RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 KIAA1217Q5T5P2 1943 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 METTL18O95568 372 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PSAPP07602 524 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 KCNA2P16389 499 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 YBX3P16989 372 aaKnown RBP eCLIP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 ARL2P36404 184 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 HK2P52789 917 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 RPS6P62753 249 aaKnown RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 MS4A2Q01362 244 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TMEM62Q0P6H9 643 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 SLC44A4Q53GD3 710 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF781Q8N8C0 355 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 BHLHE22Q8NFJ8 381 aaPredicted RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PDCD6IPQ8WUM4 868 aaKnown RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 VPS50Q96JG6 964 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 KLHL32Q96NJ5 620 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PHF12Q96QT6 1004 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 OR52B2Q96RD2 323 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 CDRT15Q96T59 188 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 CCT7Q99832 543 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 SLX1AQ9BQ83 275 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 ARHGEF38Q9NXL2 777 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 FBXO40Q9UH90 709 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 C2CD4BA6NLJ0 364 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 MAFGO15525 162 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 H2AFYO75367 372 aaKnown RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TADA2AO75478 443 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TOMM70O94826 608 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 HMGCRP04035 888 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 MYCLP12524 364 aaPredicted RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 NPR1P16066 1061 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 ME2P23368 584 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 YY1P25490 414 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 EPHA3P29320 983 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PHKA2P46019 1235 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PSMD8P48556 350 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 PDAP1Q13442 181 aaKnown RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 MGAT5BQ3V5L5 792 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 TRNP1Q6NT89 227 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 RWDD4Q6NW29 188 aaKnown RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
HOXA1-201ENST00000343060 ELMSAN1Q6PJG2 1045 aa9.91□□□□□ -0.82
HOXA1-201ENST00000343060 CCDC60Q8IWA6 550 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms