RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ELOVL4Q9GZR5 314 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ADNPQ9H2P0 1102 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NDUFA13Q9P0J0 144 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 OR12D3Q9UGF7 316 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ZNF214Q9UL59 606 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 ATRNL1Q5VV63 1379 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 KLRG2A4D1S0 409 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 TPP1O14773 563 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CILPO75339 1184 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 POMCP01189 267 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ERBB2P04626 1255 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 HIST1H2AGP0C0S8 130 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 HIST1H2ADP20671 130 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 RGS4P49798 205 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NME5P56597 212 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 POU4F1Q01851 419 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 LCLAT1Q6UWP7 414 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 EFL1Q7Z2Z2 1120 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 APLFQ8IW19 511 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 CYP4X1Q8N118 509 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CLEC4FQ8N1N0 589 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TRPM4Q8TD43 1214 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 FBXO32Q969P5 355 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 HIST1H2AHQ96KK5 128 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CATSPER2Q96P56 530 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ZNF184Q99676 751 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 HIST1H2AJQ99878 128 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 H2AFJQ9BTM1 129 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 GPR63Q9BZJ6 419 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 LGALS13Q9UHV8 139 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NUDT5Q9UKK9 219 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SORCS3Q9UPU3 1222 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ADGRA2Q96PE1 1338 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ATXN2Q99700 1313 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 ZNF197O14709 1029 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 MPOP05164 745 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 RGS2P41220 211 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 NEPROQ6NW34 567 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 MOB2Q70IA6 237 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CYGBQ8WWM9 190 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 FBXL18Q96ME1 805 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 GPR20Q99678 358 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 KLHL4Q9C0H6 718 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 MUC3BQ9H195 1237 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 CASS4Q9NQ75 786 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 UTP6Q9NYH9 597 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 PKP3Q9Y446 797 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 C5orf60A6NFR6 353 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PAX7P23759 505 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 HARS2P49590 506 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 RENBPP51606 427 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 HDAC4P56524 1084 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ACVR2BQ13705 512 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TFAP2DQ7Z6R9 452 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PSTKQ8IV42 348 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 PLD5Q8N7P1 536 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SLC44A1Q8WWI5 657 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 SIKE1Q9BRV8 207 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 MECRQ9BV79 373 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 TKTL2Q9H0I9 626 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 MMADHCQ9H3L0 296 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 PAPOLBQ9NRJ5 636 aaKnown RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.36□□□□□ -1.23
VCAN-202ENST00000342785 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
VCAN-202ENST00000342785 ADGRA3Q8IWK6 1321 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 CNTNAP2Q9UHC6 1331 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 LTN1O94822 1766 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 SLC12A8A0AV02 714 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 USP17L7P0C7H9 530 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 MYL4P12829 197 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 AXLP30530 894 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 NNMTP40261 264 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 BIRC2Q13490 618 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 AASDHQ4L235 1098 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PIK3R5Q8WYR1 880 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 CD48P09326 243 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 HSPA1AP0DMV8 641 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 HSPA1BP0DMV9 641 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 DNAJB2P25686 324 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 HSPA13P48723 471 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 TUBP50607 506 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PLK1P53350 603 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 SGO1Q5FBB7 561 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 C16orf87Q6PH81 154 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 VSTM1Q6UX27 236 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 ARCQ7LC44 396 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 PIGWQ7Z7B1 504 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 XYLT1Q86Y38 959 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 CNBD2Q96M20 576 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 LRMDAQ9H2I8 198 aa7.35□□□□□ -1.23
VCAN-202ENST00000342785 GBA2Q9HCG7 927 aaPredicted RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 RPL26L1Q9UNX3 145 aaKnown RBP7.35□□□□□ -1.23
VCAN-202ENST00000342785 GPR25O00155 361 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms