RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 TFB1MQ8WVM0 346 aaKnown RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 MYRFLQ96LU7 910 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 MRPL17Q9NRX2 175 aaKnown RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 OLA1Q9NTK5 396 aaKnown RBP17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 MARCH2Q9P0N8 246 aa17.69■□□□□ 0.42
FRMD4A-202ENST00000342409 ZNF840PA6NDX5 716 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 C5orf60A6NFR6 353 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 TLR5O60602 858 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 CNPP09543 421 aaKnown RBP17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 NUDT17P0C025 328 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 MLLT6P55198 1093 aaPredicted RBP17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 SLC29A2Q14542 456 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 TCEAL8Q8IYN2 117 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 RAD9AQ99638 391 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 ZBED2Q9BTP6 218 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 FOXP3Q9BZS1 431 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 NINJ2Q9NZG7 142 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 PAK5Q9P286 719 aa17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 ZMYND8Q9ULU4 1186 aaPredicted RBP17.68■□□□□ 0.42
FRMD4A-202ENST00000342409 METTL18O95568 372 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 SRGAP2BP0DMP2 458 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 IRAK1P51617 712 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 WASHC5Q12768 1159 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 GPS2Q13227 327 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 FASTKD3Q14CZ7 662 aaKnown RBP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 PDK1Q15118 436 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 MSS51Q4VC12 460 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 TRMT10CQ7L0Y3 403 aaKnown RBP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 BZW1Q7L1Q6 419 aaKnown RBP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 SPRED2Q7Z698 418 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 PCGF5Q86SE9 256 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 HOOK3Q86VS8 718 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 MIB1Q86YT6 1006 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 HTR3CQ8WXA8 447 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 OVCA2Q8WZ82 227 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 DPF3Q92784 378 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 P2RY11Q96G91 374 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 RBM15Q96T37 977 aaKnown RBP eCLIP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 SLC4A7Q9Y6M7 1214 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 SLC12A8A0AV02 714 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 E9PAM4 449 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 GOLGA8MH3BSY2 632 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 RNF40O75150 1001 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 CSH1P0DML2 217 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 CSH2P0DML3 217 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 MAGEA6P43360 314 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 GALNT2Q10471 571 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 TWF1Q12792 350 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 KYNUQ16719 465 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 FNBP1LQ5T0N5 605 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 FAXCQ5TGI0 409 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 ARHGAP12Q8IWW6 846 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 TBC1D31Q96DN5 1066 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 TRMT2BQ96GJ1 504 aaKnown RBP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 C1orf74Q96LT6 269 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 WDR83Q9BRX9 315 aaKnown RBP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 TSPYL1Q9H0U9 437 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 INSL5Q9Y5Q6 135 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 RAD54BQ9Y620 910 aa17.67■□□□□ 0.42
FRMD4A-202ENST00000342409 HELZP42694 1942 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 NOTCH4Q99466 2003 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 CEP290O15078 2479 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 OPA1O60313 960 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 BANF1O75531 89 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 TTC4O95801 387 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 HMBSP08397 361 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 SPATA31D3P0C874 917 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 SLC2A3P11169 496 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 HTR7P34969 479 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 MAGEA4P43358 317 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 ALDH1A3P47895 512 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 BASP1P80723 227 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 MS4A13Q5J8X5 152 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 CEP85LQ5SZL2 805 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 HEATR6Q6AI08 1181 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 RWDD4Q6NW29 188 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 SPATA31D4Q6ZUB0 917 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 TMEM150AQ86TG1 271 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 UHMK1Q8TAS1 419 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 DEPDC1BQ8WUY9 529 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 C9orf72Q96LT7 481 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 PRMT1Q99873 361 aaKnown RBP17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 ETNK1Q9HBU6 452 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 TMBIM4Q9HC24 238 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 TMEM51Q9NW97 253 aa17.66■□□□□ 0.42
FRMD4A-202ENST00000342409 A0A0A0MRY4 1105 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 E7ESA3 106 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 POLR3GO15318 223 aaPredicted RBP17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 DNAJB1P25685 340 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 TUBP50607 506 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 ERVFC1P60507 584 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 RING1Q06587 406 aa17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 PPIDQ08752 370 aaKnown RBP17.65■□□□□ 0.42
FRMD4A-202ENST00000342409 AP1B1Q10567 949 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms