RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 RALGPS1Q5JS13 557 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 PRRT2Q7Z6L0 340 aaPredicted RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 TICAM1Q8IUC6 712 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ACP6Q9NPH0 428 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SLC17A7Q9P2U7 560 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 DNAJC12Q9UKB3 198 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 TBX20Q9UMR3 447 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SQORQ9Y6N5 450 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 PSMD11O00231 422 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 CNMDO75829 334 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ADRB2P07550 413 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 VAMP7P51809 220 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 OXA1LQ15070 435 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ARHGAP44Q17R89 818 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 LSM12Q3MHD2 195 aaKnown RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 C1orf220Q5T0J3 134 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SEL1L2Q5TEA6 688 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 KBTBD6Q86V97 674 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SLC9A9Q8IVB4 645 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 GLYCTKQ8IVS8 523 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 LSMEM2Q8N112 164 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SLC15A4Q8N697 577 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 NATD1Q8N6N6 113 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ZNF641Q96N77 438 aaPredicted RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 INTS2Q9H0H0 1204 aaKnown RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 THAP2Q9H0W7 228 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 CYP26B1Q9NR63 512 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 HACD3Q9P035 362 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 PPARGC1AQ9UBK2 798 aaKnown RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 SOX13Q9UN79 622 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 RNF11Q9Y3C5 154 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 GTPBP10A4D1E9 387 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 MAPTP10636 758 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 DDX5P17844 614 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 KRT4P19013 534 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 UBA1P22314 1058 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 CXCR2P25025 360 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 EPHB1P54762 984 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 DRAP1Q14919 205 aaPredicted RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 SUZ12Q15022 739 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 TRIM16LQ309B1 348 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 WDR78Q5VTH9 848 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 SLC39A4Q6P5W5 647 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 ERO1BQ86YB8 467 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 RELL1Q8IUW5 271 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 PQLC1Q8N2U9 271 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 UBL4BQ8N7F7 174 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 XXYLT1Q8NBI6 393 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 C1orf54Q8WWF1 131 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 TMEM143Q96AN5 459 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 CDHR1Q96JP9 859 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 HERC2P3Q9BVR0 1158 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 GPR88Q9GZN0 384 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 VPS11Q9H270 941 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 HIPK3Q9H422 1215 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 FKBP14Q9NWM8 211 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 DDX56Q9NY93 547 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 ANAPC5Q9UJX4 755 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 AGO2Q9UKV8 859 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 CDC14AQ9UNH5 594 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 NFASCO94856 1347 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 PRR5-ARHGAP8B1AHC4 643 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 TMCC2O75069 709 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 RRM1P23921 792 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 ARHGAP8P85298 464 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 ITGADQ13349 1161 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 MOGQ16653 247 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 HP1BP3Q5SSJ5 553 aaPredicted RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 FAM117BQ6P1L5 589 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 LMO3Q8TAP4 145 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 TCP10LQ8TDR4 215 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 CCDC124Q96CT7 223 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 TDRD1Q9BXT4 1180 aaKnown RBP12.17□□□□□ -0.46
RTN3-203ENST00000341307 MARCH7Q9H992 704 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 VPS45Q9NRW7 570 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 POMPQ9Y244 141 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 SLC30A1Q9Y6M5 507 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 LOC285556D6RIA3 1793 aa12.17□□□□□ -0.46
RTN3-203ENST00000341307 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 MSL3P1P0C860 447 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 GLULP15104 373 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 BDNFP23560 247 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 BMPR1AP36894 532 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 PTK6Q13882 451 aa12.16□□□□□ -0.46
RTN3-203ENST00000341307 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms