RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 PDK1Q15118 436 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 CLLU1OSQ5K130 101 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 VSIG1Q86XK7 387 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ZNF567Q8N184 647 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 STK32AQ8WU08 396 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ZNF296Q8WUU4 475 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 RTP3Q9BQQ7 232 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 HAUS2Q9NVX0 235 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 NFKB1P19838 968 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 GCAP28676 217 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 SARNPP82979 210 aaKnown RBP10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 IL31Q6EBC2 164 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 UNC5AQ6ZN44 842 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 STRADAQ7RTN6 431 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 RTN4RL1Q86UN2 441 aaPredicted RBP10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 RASSF3Q86WH2 238 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 LRRC6Q86X45 466 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 TEKT4Q8WW24 435 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 MAML1Q92585 1016 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 CASP10Q92851 521 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 SERAC1Q96JX3 654 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 UNC93B1Q9H1C4 597 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 CHST12Q9NRB3 414 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 SYBUQ9NX95 663 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 TET1Q8NFU7 2136 aa10.46□□□□□ -0.73
RBFOX1-202ENST00000340209 IQANK1A0A1B0GTG1 560 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 CSH1P0DML2 217 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 CSH2P0DML3 217 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 CYP2C18P33260 490 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 POU6F1Q14863 301 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 OTUD1Q5VV17 481 aaPredicted RBP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC9A4Q6AI14 798 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 SPATA21Q7Z572 469 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 FAM136AQ96C01 138 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 NPY6RQ99463 290 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 GMIPQ9P107 970 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 KLHL14Q9P2G3 628 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ATP11BQ9Y2G3 1177 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ARHGAP42A6NI28 874 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ZBTB24O43167 697 aaPredicted RBP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 MT-CYBP00156 380 aaPredicted RBP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 BGNP21810 368 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 PTPN7P35236 360 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 RAB27AP51159 221 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 KCNJ11Q14654 390 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 PSMD5Q16401 504 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 MFSD5Q6N075 450 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 SLC24A5Q71RS6 500 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 CAND1Q86VP6 1230 aaKnown RBP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 RNF135Q8IUD6 432 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 NDUFAF2Q8N183 169 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 AGGF1Q8N302 714 aaeCLIP10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ATPAF2Q8N5M1 289 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 FBXO32Q969P5 355 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 PPP1R36Q96LQ0 422 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 NMUR1Q9HB89 426 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 ZFATQ9P243 1243 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 TRIM33Q9UPN9 1127 aa10.46□□□□□ -0.74
RBFOX1-202ENST00000340209 A0A0A0MRY4 1105 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CFAP69A5D8W1 941 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 GABRDO14764 452 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 KIF3CO14782 793 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SUN1O94901 812 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SPATA31D3P0C874 917 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 DUSP4Q13115 394 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CERCAMQ5T4B2 595 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SPATA31D4Q6ZUB0 917 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 LRRC8DQ7L1W4 858 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SPATA13Q96N96 652 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 KLHL5Q96PQ7 755 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 ACSS3Q9H6R3 686 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CNGB3Q9NQW8 809 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SMPD4Q9NXE4 827 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 EFR3BQ9Y2G0 817 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 BUD23O43709 281 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 PAGE1O75459 146 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 AVPR1AP37288 418 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 TUBP50607 506 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CORO7P57737 925 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 TTC31Q49AM3 519 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 SPDYCQ5MJ68 293 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 VARS2Q5ST30 1063 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 PDZD4Q76G19 769 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 GPR62Q9BZJ7 368 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 RANBP2P49792 3224 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CCL22O00626 93 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 KRT37O76014 449 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 ENDOD1O94919 500 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 RPL9P32969 192 aaKnown RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 USP46P62068 366 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 MGAT3Q09327 533 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 C4orf50Q6ZRC1 276 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 TMEM173Q86WV6 379 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 CFAP52Q8N1V2 620 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 AUTS2Q8WXX7 1259 aa10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 FCRL2Q96LA5 508 aaPredicted RBP10.45□□□□□ -0.74
RBFOX1-202ENST00000340209 QKIQ96PU8 341 aaKnown RBP eCLIP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms