RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CHURC1-FNTBB4DL54 471 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 F5H5T6 163 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 I6L893 689 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 ENDOD1O94919 500 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 CHRM1P11229 460 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 EIF4A3P38919 411 aaKnown RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 PTPN9P43378 593 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 KIR2DL1P43626 348 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 ZNF75DP51815 510 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 MTA1Q13330 715 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 MAMLD1Q13495 774 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 GEN1Q17RS7 908 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 TSR1Q2NL82 804 aaKnown RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 MPP7Q5T2T1 576 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 DCUN1D2Q6PH85 259 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 CCDC26Q8TAB7 109 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 ZNF653Q96CK0 615 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 SIK2Q9H0K1 926 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 TMPRSS4Q9NRS4 437 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 FBXO4Q9UKT5 387 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 ARIH1Q9Y4X5 557 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-201ENST00000340074 PAXBP1Q9Y5B6 917 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 HS3ST4Q9Y661 456 aa15.78■□□□□ 0.12
UBE3B-201ENST00000340074 AKR1B15C9JRZ8 316 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 SP9P0CG40 484 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 HLA-FP30511 346 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 HOXC13P31276 330 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 GGCXP38435 758 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 ZNF143P52747 638 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 MRPS21P82921 87 aaKnown RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 AUHQ13825 339 aaKnown RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 RNF43Q68DV7 783 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 PLEKHA7Q6IQ23 1121 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 STRADAQ7RTN6 431 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 CNGA4Q8IV77 575 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 ALLCQ8N6M5 410 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 IL17RCQ8NAC3 791 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 FAM172AQ8WUF8 416 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 CENPIQ92674 756 aaPredicted RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 MRFAP1L1Q96HT8 127 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 TMEM51Q9NW97 253 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 CNOT8Q9UFF9 292 aaKnown RBP15.77■□□□□ 0.12
UBE3B-201ENST00000340074 HCN2Q9UL51 889 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 STARD13Q9Y3M8 1113 aa15.77■□□□□ 0.12
UBE3B-201ENST00000340074 ANKRD62A6NC57 917 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 CCP110O43303 1012 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 KLF8O95600 359 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 HDAC4P56524 1084 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 OGDHQ02218 1023 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 GFPT1Q06210 699 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 CCDC122Q5T0U0 273 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 FBXL22Q6P050 247 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ALKBH5Q6P6C2 394 aaKnown RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ANKS1BQ7Z6G8 1248 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 MFN1Q8IWA4 741 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 CARNMT1Q8N4J0 409 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF513Q8N8E2 541 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 TXNDC5Q8NBS9 432 aaKnown RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ATOH1Q92858 354 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ACDQ96AP0 544 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 TRIM11Q96F44 468 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 CHP1Q99653 195 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 IRF2BPLQ9H1B7 796 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 ABCB8Q9NUT2 735 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 MYO1AQ9UBC5 1043 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 SNX10Q9Y5X0 201 aa15.77■□□□□ 0.11
UBE3B-201ENST00000340074 MUC22E2RYF6 1773 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 CKAP5Q14008 2032 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 K7ESF4 209 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 LUC7L3O95232 432 aaKnown RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 PAPSS2O95340 614 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 MYBL1P10243 752 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 TDGF1P13385 188 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 CD70P32970 193 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 DMC1Q14565 340 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF528Q3MIS6 628 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 RABGAP1LQ5R372 815 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 EGFLAMQ63HQ2 1017 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 TMEM215Q68D42 235 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 SYT13Q7L8C5 426 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 C14orf80Q86SX3 495 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 CIR1Q86X95 450 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 FIBINQ8TAL6 211 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 KCNV2Q8TDN2 545 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 IGSF8Q969P0 613 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-201ENST00000340074 HAPLN3Q96S86 360 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 DEF6Q9H4E7 631 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 FAM86C1Q9NVL1 165 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 MMP17Q9ULZ9 603 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 SLC8A2Q9UPR5 921 aa15.76■□□□□ 0.11
UBE3B-201ENST00000340074 SSU72P8A0A1W2PR75 194 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms