RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 SSX2IPQ9Y2D8 614 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 SLC4A7Q9Y6M7 1214 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 ATXN2Q99700 1313 aaKnown RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 I6L893 689 aaPredicted RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 SMAPO00193 183 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 IFNB1P01574 187 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 CCR1P32246 355 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 SEC24CP53992 1094 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 TPI1P60174 286 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 DPYSQ14117 519 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 PPP2R5DQ14738 602 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 LONRF1Q17RB8 773 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 BZW1Q7L1Q6 419 aaKnown RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 PHOSPHO2Q8TCD6 241 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 CLP1Q92989 425 aaKnown RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 XPO6Q96QU8 1125 aaKnown RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 RAD9AQ99638 391 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 EPAS1Q99814 870 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 SELENOSQ9BQE4 189 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 DNAJC17Q9NVM6 304 aaKnown RBP20.76■□□□□ 0.91
SUMO3-201ENST00000332859 LGALS13Q9UHV8 139 aa20.76■□□□□ 0.91
SUMO3-201ENST00000332859 CFAP69A5D8W1 941 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 SEC24AO95486 1093 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 ZSCAN5DPP0CG00 497 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 DNAJB2P25686 324 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 STIP1P31948 543 aaKnown RBP20.75■□□□□ 0.91
SUMO3-201ENST00000332859 XRCC4Q13426 336 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 MICALCLQ6ZW33 695 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 CDKL3Q8IVW4 592 aaPredicted RBP20.75■□□□□ 0.91
SUMO3-201ENST00000332859 RIBC1Q8N443 379 aaPredicted RBP20.75■□□□□ 0.91
SUMO3-201ENST00000332859 HTATIP2Q9BUP3 242 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 OSBPL2Q9H1P3 480 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 MTIF3Q9H2K0 278 aaKnown RBP20.75■□□□□ 0.91
SUMO3-201ENST00000332859 CYP4F11Q9HBI6 524 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.75■□□□□ 0.91
SUMO3-201ENST00000332859 FNIP2Q9P278 1114 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 NUDT5Q9UKK9 219 aa20.75■□□□□ 0.91
SUMO3-201ENST00000332859 MSI1O43347 362 aaKnown RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 ETS1P14921 441 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 CHN1P15882 459 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 SYN1P17600 705 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 GBE1Q04446 702 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 UNC45BQ8IWX7 931 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 SP7Q8TDD2 431 aaPredicted RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 PWWP2AQ96N64 755 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 HAPLN3Q96S86 360 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 ZBP1Q9H171 429 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 C10orf88Q9H8K7 445 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 OR12D3Q9UGF7 316 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 MAFFQ9ULX9 164 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 MAGED2Q9UNF1 606 aaPredicted RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 TLR6Q9Y2C9 796 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 A0A087WUV0 522 aaPredicted RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 BCLAF3A2AJT9 711 aaKnown RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FAM72CH0Y354 149 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 ZDHHC11BP0C7U3 371 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 SLC2A3P11169 496 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 ALDH1A3P47895 512 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 GDF10P55107 478 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FAM72AQ5TYM5 149 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FAM72DQ6L9T8 149 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 CENPUQ71F23 418 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FAM72BQ86X60 149 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FAM71DQ8N9W8 422 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 PDZD8Q8NEN9 1154 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 AUTS2Q8WXX7 1259 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 OVCA2Q8WZ82 227 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 UBE2OQ9C0C9 1292 aaKnown RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 SAYSD1Q9NPB0 183 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 ETNK2Q9NVF9 386 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
SUMO3-201ENST00000332859 YIPF1Q9Y548 306 aa20.74■□□□□ 0.91
SUMO3-201ENST00000332859 GREB1Q4ZG55 1949 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 C5orf60A6NFR6 353 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 CDH16O75309 829 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 CSH1P0DML2 217 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 CSH2P0DML3 217 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 CTSAP10619 480 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 ATP2A2P16615 1042 aaKnown RBP20.73■□□□□ 0.91
SUMO3-201ENST00000332859 PAFAH1B3Q15102 231 aaKnown RBP20.73■□□□□ 0.91
SUMO3-201ENST00000332859 RASIP1Q5U651 963 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 PDZD4Q76G19 769 aaPredicted RBP20.73■□□□□ 0.91
SUMO3-201ENST00000332859 EXOC3L1Q86VI1 746 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 PPIL6Q8IXY8 311 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 MDM1Q8TC05 714 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 PRCCQ92733 491 aaPredicted RBP20.73■□□□□ 0.91
SUMO3-201ENST00000332859 CCDC134Q9H6E4 229 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 RXFP1Q9HBX9 757 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 DTLQ9NZJ0 730 aa20.73■□□□□ 0.91
SUMO3-201ENST00000332859 DCLK1O15075 740 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 ALOX15BO15296 676 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 TLL1O43897 1013 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 ELF1P32519 619 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 HTR7P34969 479 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 TBX4P57082 545 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 EFEMP1Q12805 493 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 SLC10A2Q12908 348 aaPredicted RBP20.72■□□□□ 0.91
SUMO3-201ENST00000332859 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
SUMO3-201ENST00000332859 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms