RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 MOSPD3O75425 235 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 PENKP01210 267 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 MIPP30301 263 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 GRIA2P42262 883 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 GPR15P49685 360 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 RNASE9P60153 205 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 USP46P62068 366 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CYP4F8P98187 520 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 GRSF1Q12849 480 aaKnown RBP eCLIP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CDH18Q13634 790 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 SCYL2Q6P3W7 929 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TTC9BQ8N6N2 239 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 DCAF4L2Q8NA75 395 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 KIF18AQ8NI77 898 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 FIBINQ8TAL6 211 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 HCAR2Q8TDS4 363 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 KRT35Q92764 455 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 FAF2Q96CS3 445 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 LRIG1Q96JA1 1093 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 PNKPQ96T60 521 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TKTL2Q9H0I9 626 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 KCNH6Q9H252 994 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 NMUR1Q9HB89 426 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 DEC1Q9P2X7 70 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 GUCA1BQ9UMX6 200 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 NAALADL1Q9UQQ1 740 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ALG6Q9Y672 507 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 RHOCP08134 193 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 SPATA31D3P0C874 917 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 FLT3P36888 993 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ETF1P62495 437 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 NME3Q13232 169 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TFDP3Q5H9I0 405 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 FAM78AQ5JUQ0 283 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 EOGTQ5NDL2 527 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 SPATA31D4Q6ZUB0 917 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CD101Q93033 1021 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ISG20Q96AZ6 181 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ZDHHC4Q9NPG8 344 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 RAD18Q9NS91 495 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CHORDC1Q9UHD1 332 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TRHDEQ9UKU6 1024 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 MYH10P35580 1976 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TARSL2A2RTX5 802 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 MCF2LO15068 1137 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 HCRTO43612 131 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 PAGE1O75459 146 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ALDH1A2O94788 518 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 MCM3P25205 808 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CSNK1DP48730 415 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CACNA2D1P54289 1103 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CDH6P55285 790 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 PAFAH1B3Q15102 231 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TAZQ16635 292 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 TXNDC8Q6A555 127 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 DRICH1Q6PGQ1 229 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ZNF852Q6ZMS4 543 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 LGI2Q8N0V4 545 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 UMODL1-AS1Q8N2C9 162 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 ACRBPQ8NEB7 543 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 GABPB2Q8TAK5 448 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 RPRD1AQ96P16 312 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 MYADMQ96S97 322 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 DHX35Q9H5Z1 703 aaKnown RBP5.33□□□□□ -1.56
LRIT3-201ENST00000327908 CCSER2Q9H7U1 834 aa5.33□□□□□ -1.56
LRIT3-201ENST00000327908 DENND4CQ5VZ89 1909 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 E9PAM4 449 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PGRMC1O00264 195 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TRDMT1O14717 391 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 LINC01565O15544 149 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 RAMP2O60895 175 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 LRCH4O75427 683 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 COMTP21964 271 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 RECQLP46063 649 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ZBTB16Q05516 673 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ZP2Q05996 745 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 PRPSAP1Q14558 356 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 STARD3Q14849 445 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MLF2Q15773 248 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 ZC3H12AQ5D1E8 599 aaKnown RBP5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MEI1Q5TIA1 1274 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MANEALQ5VSG8 457 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SDHAF4Q5VUM1 108 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MAMSTRQ6ZN01 415 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 BBS12Q6ZW61 710 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TMEM150AQ86TG1 271 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 NT5DC3Q86UY8 548 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 MIB1Q86YT6 1006 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 CEP112Q8N8E3 955 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 LRRC57Q8N9N7 239 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 JOSD2Q8TAC2 188 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 OLIG1Q8TAK6 271 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SPOCK2Q92563 424 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 EDEM1Q92611 657 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 HES6Q96HZ4 224 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 TSGA13Q96PP4 275 aa5.32□□□□□ -1.56
LRIT3-201ENST00000327908 SNRNP25Q9BV90 132 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms