RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 TPI1P60174 286 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 PPP2R5EQ16537 467 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 FBXL22Q6P050 247 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 TTC27Q6P3X3 843 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ELMSAN1Q6PJG2 1045 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 FAF2Q96CS3 445 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 LRRC3BQ96PB8 259 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 MAK16Q9BXY0 300 aaKnown RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ADAM7Q9H2U9 754 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 TASP1Q9H6P5 420 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CTAGE15A4D2H0 777 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 LEFTY2O00292 366 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 TSPAN3O60637 253 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CTAGE8P0CG41 777 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ERCC2P18074 760 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 AIF1P55008 147 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 COPS2P61201 443 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 SLC7A9P82251 487 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 SLC10A2Q12908 348 aaPredicted RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 DPYSQ14117 519 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ALFQ53S48 1182 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 NUGGCQ68CJ6 796 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CTAGE6Q86UF2 777 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CHSY1Q86X52 802 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 PSTKQ8IV42 348 aaKnown RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ARID3BQ8IVW6 561 aaPredicted RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 CTAGE4Q8IX94 777 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 NPAS3Q8IXF0 933 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 ZNF683Q8IZ20 524 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 NPWQ8N729 165 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 MNS1Q8NEH6 495 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 SH3RF2Q8TEC5 729 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 FGF13Q92913 245 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 PRMT1Q99873 361 aaKnown RBP15.78■□□□□ 0.12
PRPF3-201ENST00000324862 OSBPL2Q9H1P3 480 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 S1PR5Q9H228 398 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 LMCD1Q9NZU5 365 aa15.78■□□□□ 0.12
PRPF3-201ENST00000324862 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 DAPK3O43293 454 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 SLU7O95391 586 aaKnown RBP15.77■□□□□ 0.12
PRPF3-201ENST00000324862 SLC2A3P11169 496 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 VIPR2P41587 438 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 MANEALQ5VSG8 457 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 NCBP2-AS2Q69YL0 99 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 TFAP2DQ7Z6R9 452 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 BBS7Q8IWZ6 715 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 ATP6V0D2Q8N8Y2 350 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 ZSCAN18Q8TBC5 510 aaPredicted RBP15.77■□□□□ 0.12
PRPF3-201ENST00000324862 ACTL9Q8TC94 416 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.77■□□□□ 0.12
PRPF3-201ENST00000324862 RSPRY1Q96DX4 576 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 KRT12Q99456 494 aa15.77■□□□□ 0.12
PRPF3-201ENST00000324862 ACSL4O60488 711 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 TJP3O95049 919 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 PTPN7P35236 360 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 NRLP54845 237 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 OTUD4Q01804 1114 aaKnown RBP15.77■□□□□ 0.11
PRPF3-201ENST00000324862 CKAP4Q07065 602 aaKnown RBP15.77■□□□□ 0.11
PRPF3-201ENST00000324862 ARHGAP15Q53QZ3 475 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 BBS12Q6ZW61 710 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 PLD4Q96BZ4 506 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 PRICKLE1Q96MT3 831 aaPredicted RBP15.77■□□□□ 0.11
PRPF3-201ENST00000324862 RNF14Q9UBS8 474 aa15.77■□□□□ 0.11
PRPF3-201ENST00000324862 H3BRJ5 948 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 MFSD11O43934 449 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 PAPLNO95428 1278 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 POU2F2P09086 479 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 FSHRP23945 695 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 KPNA1P52294 538 aaPredicted RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 RPS24P62847 133 aaKnown RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 TUBB2AQ13885 445 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 SLC9A4Q6AI14 798 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 ZNF572Q7Z3I7 529 aaPredicted RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 ZC3H18Q86VM9 953 aaKnown RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 UNC45BQ8IWX7 931 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 LGI2Q8N0V4 545 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 CEP112Q8N8E3 955 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 LEMD2Q8NC56 503 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 UBE2Q2Q8WVN8 375 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 CELF6Q96J87 481 aaKnown RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 EPAS1Q99814 870 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 TUBB2BQ9BVA1 445 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 TDP1Q9NUW8 608 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 AMACRQ9UHK6 382 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 DNPEPQ9ULA0 475 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 DENND4CQ5VZ89 1909 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 ZNF197O14709 1029 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 APOL1O14791 398 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 DCLK1O15075 740 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 TACR2P21452 398 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 CETN2P41208 172 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 GAS2L1Q99501 681 aaPredicted RBP15.76■□□□□ 0.11
PRPF3-201ENST00000324862 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 ARHGAP26Q9UNA1 814 aa15.76■□□□□ 0.11
PRPF3-201ENST00000324862 FGF19O95750 216 aa15.75■□□□□ 0.11
PRPF3-201ENST00000324862 POU3F3P20264 500 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms