RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 GAD2Q05329 585 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MPP3Q13368 585 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MAMLD1Q13495 774 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TMTC4Q5T4D3 741 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SETD3Q86TU7 594 aaPredicted RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 RAD9AQ99638 391 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 FNIP2Q9P278 1114 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MPOP05164 745 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SERPINB4P48594 390 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 PHKG1Q16816 387 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 C3orf62Q6ZUJ4 267 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 OTOP3Q7RTS5 596 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CDC26Q8NHZ8 85 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 RSRC1Q96IZ7 334 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 WDR24Q96S15 920 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CLCA2Q9UQC9 943 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 ANKRD6Q9Y2G4 727 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TBL1XO60907 577 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 NCF2P19878 526 aaPredicted RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 ATP4AP20648 1035 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MGAT5Q09328 741 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SERINC5Q86VE9 423 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TDRD5Q8NAT2 981 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 KCTD13Q8WZ19 329 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 VPS51Q9UID3 782 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TSPAN3O60637 253 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
CCDC149-201ENST00000324309 KDELR1P24390 212 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SATB1Q01826 763 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 SLC22A9Q8IVM8 553 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 VPS37AQ8NEZ2 397 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 MAML1Q92585 1016 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 YY1AP1Q9H869 796 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CHMP2BQ9UQN3 213 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 STXBP5LQ9Y2K9 1186 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
CCDC149-201ENST00000324309 CASQ2O14958 399 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 SLC2A4P14672 509 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 MTHFRP42898 656 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 SPIRE1Q08AE8 756 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 KCNA1Q09470 495 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 MIIPQ5JXC2 388 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ANKMY2Q8IV38 441 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 TRIB2Q92519 343 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ASPSCR1Q9BZE9 553 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 RETREG1Q9H6L5 497 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 TBC1D30Q9Y2I9 924 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 FIS1Q9Y3D6 152 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 STARD13Q9Y3M8 1113 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 CASP2P42575 452 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 KDELC2Q7Z4H8 507 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 CFAP61Q8NHU2 1237 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 OTUB1Q96FW1 271 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 LRRC1Q9BTT6 524 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 BBS2Q9BXC9 721 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 F5H423 210 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ARHGDIAP52565 204 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 LBX1P52954 281 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 REPS1Q96D71 796 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 DEC1Q9P2X7 70 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 IRAK2O43187 625 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
CCDC149-201ENST00000324309 PTPN9P43378 593 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 RTL10Q7L3V2 364 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 ZNF438Q7Z4V0 828 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 LRRC6Q86X45 466 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 RGS18Q9NS28 235 aa13.1□□□□□ -0.31
CCDC149-201ENST00000324309 RBM12Q9NTZ6 932 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms