RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TNS4Q8IZW8 715 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 ADCY4Q8NFM4 1077 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PPP1R36Q96LQ0 422 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 RIMS3Q9UJD0 308 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 AK5Q9Y6K8 562 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 WDR46O15213 610 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 MAFGO15525 162 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 DGKIO75912 1065 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 MICAL2O94851 1124 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 CPA3P15088 417 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 MX2P20592 715 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 ARL2P36404 184 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 HARS2P49590 506 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 EMP3P54852 163 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 C16orf89Q6UX73 402 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 KYQ8NBH2 561 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 BHLHE22Q8NFJ8 381 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PCDH19Q8TAB3 1148 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 UBA3Q8TBC4 463 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF526Q8TF50 670 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 GCOM2Q9BZD3 368 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 XYLT2Q9H1B5 865 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 NGRNQ9NPE2 291 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PSAT1Q9Y617 370 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PEX10O60683 326 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 RGS20O76081 388 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 CDH2P19022 906 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 MAGEA8P43361 318 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 APOFQ13790 326 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PPM1LQ5SGD2 360 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 BSPRYQ5W0U4 402 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 OR6B2Q6IFH4 312 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 ZFP1Q6P2D0 407 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 EPGNQ6UW88 154 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 BNC2Q6ZN30 1099 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 TRIM67Q6ZTA4 783 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 DSELQ8IZU8 1212 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 LILRA2Q8N149 483 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 USP13Q92995 863 aaPredicted RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 OR52B2Q96RD2 323 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 TXNDC16Q9P2K2 825 aa18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PRPF19Q9UMS4 504 aaKnown RBP18.36■□□□□ 0.53
PRKCB-202ENST00000321728 PRKCGP05129 697 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 THRAP10827 490 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 TRNP1Q6NT89 227 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 RSBN1LQ6PCB5 846 aaPredicted RBP18.35■□□□□ 0.53
PRKCB-202ENST00000321728 ILDR2Q71H61 639 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 MAPK15Q8TD08 544 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 ATG4CQ96DT6 458 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 PKP2Q99959 881 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 CDH19Q9H159 772 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 TCF7L2Q9NQB0 619 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 HMGXB4Q9UGU5 601 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 CEPT1Q9Y6K0 416 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 NEMP1O14524 444 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 TBC1D12O60347 775 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 APBA3O96018 575 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 SESN2P58004 480 aaPredicted RBP18.35■□□□□ 0.53
PRKCB-202ENST00000321728 CAPSQ13938 189 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 PDK2Q15119 407 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
PRKCB-202ENST00000321728 TRIML2Q8N7C3 387 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
PRKCB-202ENST00000321728 HSPBAP1Q96EW2 488 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 TWNKQ96RR1 684 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 RNF146Q9NTX7 359 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 KIAA1217Q5T5P2 1943 aa18.35■□□□□ 0.53
PRKCB-202ENST00000321728 A0A1B0GTW7 788 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 TNNC2P02585 160 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 SUPT20HL2P0C7V6 817 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 TPSB2P20231 275 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PIK3R1P27986 724 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 HSPA13P48723 471 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 SULT2A1Q06520 285 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 TPSAB1Q15661 275 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 SUPT20HL1Q3ZLR7 823 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 SH3D19Q5HYK7 790 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 ALDH16A1Q8IZ83 802 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PIWIL1Q96J94 861 aaKnown RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PCDH18Q9HCL0 1135 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 BCAP29Q9UHQ4 241 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PCDHB12Q9Y5F1 795 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 C2CD4BA6NLJ0 364 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 EGFRP00533 1210 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 OATP04181 439 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 ENO3P13929 434 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PTPN11Q06124 597 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 LPIN1Q14693 890 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 STILQ15468 1287 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 CA9Q16790 459 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF667Q5HYK9 610 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 LRRC8BQ6P9F7 803 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 BORAQ6PGQ7 559 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms