RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 IGSF8Q969P0 613 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 MRFAP1L1Q96HT8 127 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 DDX50Q9BQ39 737 aaKnown RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 MAGEB5Q9BZ81 275 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 SIK2Q9H0K1 926 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 PRMT8Q9NR22 394 aaPredicted RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 MYO1AQ9UBC5 1043 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 CNOT8Q9UFF9 292 aaKnown RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 CHURC1-FNTBB4DL54 471 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 AKR1B15C9JRZ8 316 aaPredicted RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 CCP110O43303 1012 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 TPM1P09493 284 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 HLA-FP30511 346 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 HDAC4P56524 1084 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 CSTF1Q05048 431 aaKnown RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
LRRC42-201ENST00000319223 MPP7Q5T2T1 576 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 TMEM215Q68D42 235 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 PPP1R2P3Q6NXS1 205 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 FAM172AQ8WUF8 416 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 ZNF653Q96CK0 615 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 PRRX2Q99811 253 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 THAP2Q9H0W7 228 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 KCNH6Q9H252 994 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 PARVAQ9NVD7 372 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 SLC27A6Q9Y2P4 619 aa17.18■□□□□ 0.34
LRRC42-201ENST00000319223 SP9P0CG40 484 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 TDGF1P13385 188 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 CXCL12P48061 93 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 ZNF143P52747 638 aaPredicted RBP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 FSCBQ5H9T9 825 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 ALKBH5Q6P6C2 394 aaKnown RBP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 STRADAQ7RTN6 431 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 VPS36Q86VN1 386 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 ALLCQ8N6M5 410 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 IL17RCQ8NAC3 791 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 HJURPQ8NCD3 748 aaPredicted RBP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 LMLNQ96KR4 655 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 ACOX2Q99424 681 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 IER2Q9BTL4 223 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 SLC2A11Q9BYW1 496 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 IRX2Q9BZI1 471 aaPredicted RBP17.17■□□□□ 0.34
LRRC42-201ENST00000319223 VANGL2Q9ULK5 521 aa17.17■□□□□ 0.34
LRRC42-201ENST00000319223 TMEM191CA6NGB0 347 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 F5H5T6 163 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 K7ESF4 209 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 HNRNPLP14866 589 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 CD70P32970 193 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 CCR3P51677 355 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 DMWDQ09019 674 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ZNF252P-AS1Q0IIN9 211 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 EGFLAMQ63HQ2 1017 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ZNF683Q8IZ20 524 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 CARNMT1Q8N4J0 409 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 SORCS1Q8WY21 1168 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ABCB8Q9NUT2 735 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 FAM86C1Q9NVL1 165 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 STARD13Q9Y3M8 1113 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 SGK1O00141 431 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ADAM23O75077 832 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 KLF8O95600 359 aaPredicted RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 MRPS21P82921 87 aaKnown RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 KIAA0907Q7Z7F0 614 aaPredicted RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 CNGA4Q8IV77 575 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 MFN1Q8IWA4 741 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 CCDC185Q8N715 623 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 TXNDC5Q8NBS9 432 aaKnown RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ARHGEF26Q96DR7 871 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ANP32EQ9BTT0 268 aa17.16■□□□□ 0.34
LRRC42-201ENST00000319223 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 ZNHIT6Q9NWK9 470 aaKnown RBP17.16■□□□□ 0.34
LRRC42-201ENST00000319223 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ATG13O75143 517 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 LUC7L3O95232 432 aaKnown RBP17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ADRA1BP35368 520 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 WASP42768 502 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 GALCP54803 685 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 PTPN5P54829 565 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 LMAN2Q12907 356 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 SLC18A3Q16572 532 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ANKS1BQ7Z6G8 1248 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ADIPOR2Q86V24 386 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ARFGAP1Q8N6T3 406 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 ZNF513Q8N8E2 541 aaPredicted RBP17.15■□□□□ 0.34
LRRC42-201ENST00000319223 FIBINQ8TAL6 211 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 RPRD1AQ96P16 312 aaPredicted RBP17.15■□□□□ 0.34
LRRC42-201ENST00000319223 CNPY3Q9BT09 278 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 PACSIN1Q9BY11 444 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 SPTLC3Q9NUV7 552 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 FBXO4Q9UKT5 387 aa17.15■□□□□ 0.34
LRRC42-201ENST00000319223 MYO18AQ92614 2054 aaKnown RBP17.14■□□□□ 0.34
LRRC42-201ENST00000319223 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms