RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 ANXA11P50995 505 aaKnown RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ACLYP53396 1101 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 EIF6P56537 245 aaKnown RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 GK3PQ14409 553 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 MAPK11Q15759 364 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 DDR2Q16832 855 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 PPHLN1Q8NEY8 458 aaKnown RBP4.62□□□□□ -1.67
CNOT1-201ENST00000317147 RIT2Q99578 217 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 KLHL31Q9H511 634 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 SIK3Q9Y2K2 1263 aa4.62□□□□□ -1.67
CNOT1-201ENST00000317147 A6NHS1 94 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 COL6A2P12110 1019 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 MLNP12872 115 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 FOLH1Q04609 750 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 NTRK3Q16288 839 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 KHDRBS2Q5VWX1 349 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SLFN11Q7Z7L1 901 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 STX12Q86Y82 276 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PGAM4Q8N0Y7 254 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GJD3Q8N144 294 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ASZ1Q8WWH4 475 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 NUDT12Q9BQG2 462 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF577Q9BSK1 485 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PDCD10Q9BUL8 212 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SLC6A15Q9H2J7 730 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 FAM32AQ9Y421 112 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 AP4B1Q9Y6B7 739 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 USP54Q70EL1 1684 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 DNM1LO00429 736 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 DGAT1O75907 488 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 IL6P05231 212 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GARTP22102 1010 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 EIF3EP60228 445 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SCN1BQ07699 218 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 LRRC74AQ0VAA2 488 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 DLG1Q12959 904 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CTTNQ14247 550 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TRIM71Q2Q1W2 868 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF667Q5HYK9 610 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CACHD1Q5VU97 1274 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ACAD10Q6JQN1 1059 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 UGT3A1Q6NUS8 523 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 MMTAG2Q9BU76 263 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 FSD1LQ9BXM9 530 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 IFT80Q9P2H3 777 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 VWA8A3KMH1 1905 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TIAM2Q8IVF5 1701 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PSMD12O00232 456 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TPD52L2O43399 206 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 IFNA7P01567 189 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 P4HBP07237 508 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GRIA2P42262 883 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GNG2P59768 71 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PLOD1Q02809 727 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 INO80DQ53TQ3 878 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 EFHC2Q5JST6 749 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ANGEL2Q5VTE6 544 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 UBE2Q1Q7Z7E8 422 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PROSER1Q86XN7 944 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TSEN2Q8NCE0 465 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GPATCH1Q9BRR8 931 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CHID1Q9BWS9 393 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TRIM54Q9BYV2 358 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SLC13A4Q9UKG4 626 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CLDN3O15551 220 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ASNSP08243 561 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PRKAR1AP10644 381 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PDPK2PQ6A1A2 396 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 C18orf8Q96DM3 657 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 MTMR8Q96EF0 704 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PACSIN1Q9BY11 444 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CELF4Q9BZC1 486 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TTYH3Q9C0H2 523 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 IMPAD1Q9NX62 359 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PCDH15Q96QU1 1955 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TRIM13O60858 407 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 TRIM3O75382 744 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ANXA9O76027 345 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SEC24AO95486 1093 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 RPLP2P05387 115 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PGAM1P18669 254 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SLC26A3P40879 764 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CCT8P50990 548 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GMFBP60983 142 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 FOXM1Q08050 763 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ZNF181Q2M3W8 571 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 SPANXN3Q5MJ09 141 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 MZT2AQ6P582 158 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 CLVS1Q8IUQ0 354 aaPredicted RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 FAM45AQ8TCE6 357 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 PTCD2Q8WV60 388 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 DDX17Q92841 729 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 ANKEF1Q9NU02 776 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 MRPL39Q9NYK5 338 aaKnown RBP4.61□□□□□ -1.67
CNOT1-201ENST00000317147 GTSE1Q9NYZ3 720 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 EHD3Q9NZN3 535 aa4.61□□□□□ -1.67
CNOT1-201ENST00000317147 NPAP1Q9NZP6 1156 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms