RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR6Y1Q8NGX8 325 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 MMP19Q99542 508 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ADNPQ9H2P0 1102 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PCMTD2Q9NV79 361 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 MCM8Q9UJA3 840 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 KRT34O76011 436 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 GPIP06744 558 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ELF3P78545 371 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TUBA3CQ13748 450 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 LRRC55Q6ZSA7 311 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM132CQ8N3T6 1108 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PADI4Q9UM07 663 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 AURKCQ9UQB9 309 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 A0A0A0MRY4 1105 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 HOXA13P31271 388 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 HPCAL1P37235 193 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 OTUD4Q01804 1114 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 VGLL2Q8N8G2 317 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 LENG9Q96B70 501 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SPATA13Q96N96 652 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 THAP2Q9H0W7 228 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SEMA6BQ9H3T3 888 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 CLK4Q9HAZ1 481 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ZFC3H1O60293 1989 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PRR23D1E9PI22 279 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF263O14978 683 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PSMG1O95456 288 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PRR23D2P0DMB1 279 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 PABPC1P11940 636 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 GUCY1A2P33402 732 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 MAGEA10P43363 369 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 CLCN5P51795 746 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SPOCD1Q6ZMY3 1216 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 LRRC52Q8N7C0 313 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TBC1D16Q8TBP0 767 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ZKSCAN4Q969J2 545 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 MATN2O00339 956 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 KCNA2P16389 499 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 GRK3P35626 688 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 DMC1Q14565 340 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 NKAPQ8N5F7 415 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TMEM120AQ9BXJ8 343 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 ARFGEF1Q9Y6D6 1849 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SIN3BO75182 1162 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SRPRAP08240 638 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 TARSP26639 723 aaKnown RBP9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SLC1A6P48664 564 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 CYGBQ8WWM9 190 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 SLC12A4Q9UP95 1085 aa9.02□□□□□ -0.97
COL6A5-202ENST00000312481 DOT1LQ8TEK3 1739 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ALOX15BO15296 676 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 WARSP23381 471 aaKnown RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GNL1P36915 607 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF143P52747 638 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PRR5LQ6MZQ0 368 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 COLGALT2Q8IYK4 626 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 TDRD5Q8NAT2 981 aaKnown RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SLC44A5Q8NCS7 719 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 CD101Q93033 1021 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 FAM162AQ96A26 154 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 TRIM51Q9BSJ1 452 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 TAS2R13Q9NYV9 303 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 RAPGEFL1Q9UHV5 662 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 FOCADQ5VW36 1801 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PRIM2P49643 509 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 DEPDC1Q5TB30 811 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 STRA8Q7Z7C7 330 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 DHFR2Q86XF0 187 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ACTL9Q8TC94 416 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 HM13Q8TCT9 377 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 LENG1Q96BZ8 264 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 WNK4Q96J92 1243 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SERPINB11Q96P15 392 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ELOVL4Q9GZR5 314 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 TBCCD1Q9NVR7 557 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 GABRB2P47870 512 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 POU5F1BQ06416 359 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ITGADQ13349 1161 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SPDYE1Q8NFV5 336 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ZNF420Q8TAQ5 688 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 AKAP3O75969 853 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 CD151P48509 253 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 PTPN11Q06124 597 aaPredicted RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 RBBP7Q16576 425 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 ZCCHC8Q6NZY4 707 aaKnown RBP9.01□□□□□ -0.97
COL6A5-202ENST00000312481 OR56A4Q8NGH8 313 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 TSPEARQ8WU66 669 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 UROC1Q96N76 676 aa9.01□□□□□ -0.97
COL6A5-202ENST00000312481 HEMGNQ9BXL5 484 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms