RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 A0A0A0MRY4 1105 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 E7EVH7 732 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 FAM72CH0Y354 149 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 FGF10O15520 208 aaPredicted RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 MTSS1O43312 755 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 OPHN1O60890 802 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 TMEM63AO94886 807 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 VNN2O95498 520 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 MX2P20592 715 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 YWHAQP27348 245 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 HOXC13P31276 330 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 CDK16Q00536 496 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 PDIA2Q13087 525 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 MTA1Q13330 715 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 SEMA5AQ13591 1074 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 AUHQ13825 339 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 DDR2Q16832 855 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 UBAP2Q5T6F2 1119 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 RSPO2Q6UXX9 243 aaPredicted RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 TDRPQ86YL5 185 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 GPR65Q8IYL9 337 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 VPS52Q8N1B4 723 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 ATP11CQ8NB49 1132 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 ATAD1Q8NBU5 361 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 RNF34Q969K3 372 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 SLC39A13Q96H72 371 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 IGSF21Q96ID5 467 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 C1orf74Q96LT6 269 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 C9orf72Q96LT7 481 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 SPATA13Q96N96 652 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 TTLL2Q9BWV7 592 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 CAPS2Q9BXY5 557 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 CENPHQ9H3R5 247 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 CNOT10Q9H9A5 744 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 NMUR1Q9HB89 426 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 PRDM5Q9NQX1 630 aaPredicted RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 FNIP2Q9P278 1114 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 OR12D3Q9UGF7 316 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
TPM3-202ENST00000302206 TLR6Q9Y2C9 796 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 MYO16Q9Y6X6 1858 aa12.37□□□□□ -0.43
TPM3-202ENST00000302206 KCNU1A8MYU2 1149 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 NT5C1B-RDH14C9J2C7 533 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 SPAG6O75602 509 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 ZDHHC11BP0C7U3 371 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 VAV1P15498 845 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 PHBP35232 272 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 LMAN1P49257 510 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 MAGOHP61326 146 aaKnown RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 COG7P83436 770 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 GALNT2Q10471 571 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 RNF19BQ6ZMZ0 732 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 ARHGEF18Q6ZSZ5 1173 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 TAS1R1Q7RTX1 841 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 TMEM173Q86WV6 379 aaPredicted RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 LZTR1Q8N653 840 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 FBXO22Q8NEZ5 403 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 OVCA2Q8WZ82 227 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 CASP10Q92851 521 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 B3GALT6Q96L58 329 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 LRRC4CQ9HCJ2 640 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 TLR8Q9NR97 1041 aaKnown RBP12.36□□□□□ -0.43
TPM3-202ENST00000302206 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3-202ENST00000302206 STK39Q9UEW8 545 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 MFHAS1Q9Y4C4 1052 aa12.36□□□□□ -0.43
TPM3-202ENST00000302206 TCRBV7S3A2A0A539 114 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 TLDC2A0PJX2 215 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 CDH16O75309 829 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 PAGE1O75459 146 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 LRIG2O94898 1065 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 UPP2O95045 317 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 SOD2P04179 222 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 GSTA2P09210 222 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 ATP2A2P16615 1042 aaKnown RBP12.35□□□□□ -0.43
TPM3-202ENST00000302206 LAG3P18627 525 aa12.35□□□□□ -0.43
TPM3-202ENST00000302206 MAGEA3P43357 314 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms