RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 DPP3Q9NY33 737 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 CPSF3Q9UKF6 684 aaKnown RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 AFG3L2Q9Y4W6 797 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 C15orf38-AP3S2A0A0A6YYH1 394 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 RNF103O00237 685 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 VAV1P15498 845 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 TGM2P21980 687 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 GRK2P25098 689 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 SPRP35270 261 aaPredicted RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 SULT1E1P49888 294 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 CHN2P52757 468 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 PDE1CQ14123 709 aaPredicted RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 USP10Q14694 798 aaKnown RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 DLG2Q15700 870 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 PMF1Q6P1K2 205 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 FRMD7Q6ZUT3 714 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 ARPINQ7Z6K5 226 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 ADGRF2Q8IZF7 708 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 SNX25Q9H3E2 840 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 COG4Q9H9E3 785 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 PCDHA11Q9Y5I1 949 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 PSAT1Q9Y617 370 aa12.92□□□□□ -0.34
TMEM200A-201ENST00000296978 A0A096LPK6 155 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ACKR2O00590 384 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 HNRNPRO43390 633 aaKnown RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PTPN7P35236 360 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ACAP1Q15027 740 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 FAM156AQ8NDB6 213 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 OR52K1Q8NGK4 314 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 LENG8Q96PV6 779 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 DHRS4Q9BTZ2 278 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 LHX5Q9H2C1 402 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 SIRPGQ9P1W8 387 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 RGS17Q9UGC6 210 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ADAMTS6Q9UKP5 1117 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PHGDHO43175 533 aaKnown RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PLIN3O60664 434 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 CSPG5O95196 566 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 GPD2P43304 727 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 GABRB2P47870 512 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 IDH3AP50213 366 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PGGT1BP53609 377 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 CLDN10P78369 228 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 SEPT6Q14141 434 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 FOXB2Q5VYV0 432 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ARCQ7LC44 396 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 SPATA6LQ8N4H0 392 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 JADE3Q92613 823 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 EXT2Q93063 718 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PDLIM7Q9NR12 457 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 A0A088AWK7 358 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 GPR25O00155 361 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 PAPSS1O43252 624 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 MAFO75444 373 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 STBD1O95210 358 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 IL18RAPO95256 599 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 AMHP03971 560 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 STILQ15468 1287 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 BNC2Q6ZN30 1099 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 SYBUQ9NX95 663 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ZNF214Q9UL59 606 aaPredicted RBP12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
TMEM200A-201ENST00000296978 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 NFASCO94856 1347 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 TPST1O60507 370 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 TFE3P19532 575 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 NAGLUP54802 743 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 KCTD2Q14681 263 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 Q3C1V9 767 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 GJC2Q5T442 439 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 KYQ8NBH2 561 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 CLEC4CQ8WTT0 213 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 LRRC39Q96DD0 335 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 CCDC106Q9BWC9 280 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 XYLT2Q9H1B5 865 aa12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
TMEM200A-201ENST00000296978 BIRC5O15392 142 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms