RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 PHF13Q86YI8 300 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 CCDC117Q8IWD4 279 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 ALLCQ8N6M5 410 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 ZNF513Q8N8E2 541 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 IQCDQ96DY2 449 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 NPY6RQ99463 290 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 NUCKS1Q9H1E3 243 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 WDCPQ9H6R7 721 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 YY1AP1Q9H869 796 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 CWC15Q9P013 229 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 TMEM59LQ9UK28 342 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.41
HMGB2-201ENST00000296503 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.41
HMGB2-201ENST00000296503 A0A1W2PQJ5 194 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PRRT4C9JH25 899 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 K7ESF4 209 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 F9P00740 461 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 KRT3P12035 628 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 HOXD9P28356 352 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 FLT3P36888 993 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 NBL1P41271 181 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 FNTBP49356 437 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TUBB4BP68371 445 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 EIF4EBP2Q13542 120 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 LGI2Q8N0V4 545 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 EMC1Q8N766 993 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TBCBQ99426 244 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 IRX2Q9BZI1 471 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 CAPN11Q9UMQ6 739 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 SLC27A6Q9Y2P4 619 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TFE3P19532 575 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TACR2P21452 398 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 HOXC13P31276 330 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PRKCIP41743 596 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 WASP42768 502 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 SGSHP51688 502 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 ZBED6P86452 979 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PTP4A2Q12974 167 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 GEN1Q17RS7 908 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 ERCC6LQ2NKX8 1250 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 EOGTQ5NDL2 527 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 TRMT11Q7Z4G4 463 aaKnown RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 CARNMT1Q8N4J0 409 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 HJURPQ8NCD3 748 aaPredicted RBP12.51□□□□□ -0.41
HMGB2-201ENST00000296503 KCNV2Q8TDN2 545 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 UCMAQ8WVF2 138 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 UBXN4Q92575 508 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 NT5C3BQ969T7 300 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 SIK2Q9H0K1 926 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PIGVQ9NUD9 493 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 MMP17Q9ULZ9 603 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 STARD13Q9Y3M8 1113 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 PCDHGA2Q9Y5H1 932 aa12.51□□□□□ -0.41
HMGB2-201ENST00000296503 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
HMGB2-201ENST00000296503 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 F5H5T6 163 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 SGK1O00141 431 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 GFRA2O00451 464 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 GJB6O95452 261 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 TDGF1P13385 188 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 CASP14P31944 242 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 RPS24P62847 133 aaKnown RBP12.5□□□□□ -0.41
HMGB2-201ENST00000296503 ATP11AP98196 1134 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 DMWDQ09019 674 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 MTA1Q13330 715 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 HSF5Q4G112 596 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-201ENST00000296503 MPP7Q5T2T1 576 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 PPP1R2P3Q6NXS1 205 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 ARCQ7LC44 396 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 ANKS1BQ7Z6G8 1248 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 MFN1Q8IWA4 741 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 CHPFQ8IZ52 775 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 MCOLN2Q8IZK6 566 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 ZBTB44Q8NCP5 570 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 NKD2Q969F2 451 aaPredicted RBP12.5□□□□□ -0.41
HMGB2-201ENST00000296503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMGB2-201ENST00000296503 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
HMGB2-201ENST00000296503 TAS2R14Q9NYV8 317 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms