RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PPP1R12AO14974 1030 aaPredicted RBP23.55■■□□□ 1.36
PTX3-201ENST00000295927 GCATO75600 419 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 CTSAP10619 480 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 CEP85LQ5SZL2 805 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 ARTNQ5T4W7 220 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 PDZD8Q8NEN9 1154 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 HTR3CQ8WXA8 447 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 RXFP1Q9HBX9 757 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 TCRBV7S3A2A0A539 114 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 C5orf60A6NFR6 353 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 PRRG1O14668 218 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 POLR3GO15318 223 aaPredicted RBP23.54■■□□□ 1.36
PTX3-201ENST00000295927 RNF40O75150 1001 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 NUDT17P0C025 328 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 ELF1P32519 619 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 HTR7P34969 479 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 ZNF844Q08AG5 666 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 AP1B1Q10567 949 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 CEP128Q6ZU80 1094 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 RELL1Q8IUW5 271 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 CCNYQ8ND76 341 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 SP7Q8TDD2 431 aaPredicted RBP23.54■■□□□ 1.36
PTX3-201ENST00000295927 OVCA2Q8WZ82 227 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 C1orf74Q96LT6 269 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 ZNF512Q96ME7 567 aaPredicted RBP23.54■■□□□ 1.36
PTX3-201ENST00000295927 RAB6BQ9NRW1 208 aa23.54■■□□□ 1.36
PTX3-201ENST00000295927 SLC12A8A0AV02 714 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 GOLGA8MH3BSY2 632 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 APOEP02649 317 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 HOXC13P31276 330 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 CA8P35219 290 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 MLLT6P55198 1093 aaPredicted RBP23.53■■□□□ 1.36
PTX3-201ENST00000295927 NRG1Q02297 640 aaPredicted RBP23.53■■□□□ 1.36
PTX3-201ENST00000295927 CREMQ03060 361 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 GAD2Q05329 585 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 PIK3R6Q5UE93 754 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 SNX30Q5VWJ9 437 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 TCEAL8Q8IYN2 117 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 ARL8AQ96BM9 186 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 TBC1D31Q96DN5 1066 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 MYRFLQ96LU7 910 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 LCHNA4D1U4 455 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 TLL1O43897 1013 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 TMEM63AO94886 807 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 IGLV3-27P01718 113 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 SHBGP04278 402 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 ATP2A2P16615 1042 aaKnown RBP23.53■■□□□ 1.36
PTX3-201ENST00000295927 SERPINB6P35237 376 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 TWF1Q12792 350 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 C4orf22Q6V702 233 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 C14orf80Q86SX3 495 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 ZNF276Q8N554 614 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 P2RY11Q96G91 374 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 SSX2IPQ9Y2D8 614 aa23.53■■□□□ 1.36
PTX3-201ENST00000295927 ZNF840PA6NDX5 716 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 GOLGA8KD6RF30 607 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 E9PAM4 449 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 SMAPO00193 183 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 HMBSP08397 361 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 CNPP09543 421 aaKnown RBP23.52■■□□□ 1.36
PTX3-201ENST00000295927 EIF3BP55884 814 aaKnown RBP23.52■■□□□ 1.36
PTX3-201ENST00000295927 KCNJ11Q14654 390 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 VEPH1Q14D04 833 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 TAF12Q16514 161 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 KYNUQ16719 465 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 ATP6V0D2Q8N8Y2 350 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 UHMK1Q8TAS1 419 aaKnown RBP23.52■■□□□ 1.36
PTX3-201ENST00000295927 PHOSPHO2Q8TCD6 241 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 CDK5RAP1Q96SZ6 601 aaKnown RBP23.52■■□□□ 1.36
PTX3-201ENST00000295927 SAYSD1Q9NPB0 183 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 NINJ2Q9NZG7 142 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 SLC12A6Q9UHW9 1150 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 ZMYND8Q9ULU4 1186 aaPredicted RBP23.52■■□□□ 1.36
PTX3-201ENST00000295927 MAFFQ9ULX9 164 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 INSL5Q9Y5Q6 135 aa23.52■■□□□ 1.36
PTX3-201ENST00000295927 NCAM2O15394 837 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 FGF10O15520 208 aaPredicted RBP23.51■■□□□ 1.35
PTX3-201ENST00000295927 TTC4O95801 387 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 MAGEA4P43358 317 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 TUBP50607 506 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 IFFO1Q0D2I5 559 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 PLD1Q13393 1074 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 FAXCQ5TGI0 409 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 TRMT2BQ96GJ1 504 aaKnown RBP23.51■■□□□ 1.35
PTX3-201ENST00000295927 BTN2A3PQ96KV6 586 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 KLC2Q9H0B6 622 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 CATSPERBQ9H7T0 1116 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 SHROOM3Q8TF72 1996 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 A0A0A0MRY4 1105 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 CHADO15335 359 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ACSL3O95573 720 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 RING1Q06587 406 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 GALNT2Q10471 571 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 HIF1AQ16665 826 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 TTMPQ5BVD1 217 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 MS4A13Q5J8X5 152 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ANKRD20A2Q5SQ80 823 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ANKRD20A1Q5TYW2 823 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ANKRD20A3Q5VUR7 823 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 CENPUQ71F23 418 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms