RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 HALP42357 657 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM71AQ8IYT1 594 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 PANX3Q96QZ0 392 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 OXCT2Q9BYC2 517 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RPN2P04844 631 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 CDH2P19022 906 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 TERF2Q15554 542 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 LRRC49Q8IUZ0 686 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 EPN3Q9H201 632 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 CNGB3Q9NQW8 809 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RAD18Q9NS91 495 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SLC24A2Q9UI40 661 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 PLIN4Q96Q06 1357 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 C1QTNF3-AMACRE9PGA6 284 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SERPINA13PQ6UXR4 307 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 BRI3BPQ8WY22 251 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SHC3Q92529 594 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 PAFAH2Q99487 392 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SKOR1P84550 965 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SETMARQ53H47 684 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SLC45A4Q5BKX6 768 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 PLPP4Q5VZY2 271 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 FOXR2Q6PJQ5 311 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 NR1H4Q96RI1 486 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SIK3Q9Y2K2 1263 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 TPBGLP0DKB5 382 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 FGFR1P11362 822 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 BTKQ06187 659 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 IL17AQ16552 155 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 AASDHQ4L235 1098 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RARS2Q5T160 578 aaKnown RBP18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM35AQ86V20 835 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 KATNAL2Q8IYT4 538 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 MFSD14AQ96MC6 490 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZYG11BQ9C0D3 744 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RBPJLQ9UBG7 517 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 RAD54BQ9Y620 910 aa18.12■□□□□ 0.49
CDC42EP3-201ENST00000295324 SMIM28A0A1B0GU29 152 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 B4GALT4O60513 344 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 CNTN1Q12860 1018 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 PRKAA1Q13131 559 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 RRP1BQ14684 758 aaKnown RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM183BPQ6ZVS7 135 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 MON1AQ86VX9 555 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 FBXO22Q8NEZ5 403 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TBL1YQ9BQ87 522 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 SLC45A1Q9Y2W3 748 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 CASZ1Q86V15 1759 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 MTA2O94776 668 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TPH1P17752 444 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 KBTBD12Q3ZCT8 623 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 DENND1CQ8IV53 801 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 VPS51Q9UID3 782 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ERI2A8K979 691 aaKnown RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 HOXB8P17481 243 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TSHZ1Q6ZSZ6 1077 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ST13P4Q8IZP2 240 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TNIP2Q8NFZ5 429 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 CLEC4DQ8WXI8 215 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZDHHC6Q9H6R6 413 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 RAB23Q9ULC3 237 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 RPTORQ8N122 1335 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 IGKV6D-41A0A0C4DH26 115 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TLR5O60602 858 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 PYGMP11217 842 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 KDELR1P24390 212 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 GLRBP48167 497 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 CSHL1Q14406 222 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ARID3BQ8IVW6 561 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 C7orf61Q8IZ16 206 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 OTULINQ96BN8 352 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 CDC42EP4Q9H3Q1 356 aaKnown RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ACTR8Q9H981 624 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 TAS2R13Q9NYV9 303 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF510Q9Y2H8 683 aa18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 MAFBQ9Y5Q3 323 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP3-201ENST00000295324 NDUFS2O75306 463 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 GPC1P35052 558 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 VSTM1Q6UX27 236 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 CEP19Q96LK0 163 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 AKAP7Q9P0M2 348 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 DTNAQ9Y4J8 743 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 CNTNAP1P78357 1384 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 NCALDP61601 193 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 MED21Q13503 144 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 DUSP16Q9BY84 665 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 MAN1C1Q9NR34 630 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 NCKIPSDQ9NZQ3 722 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 CES2O00748 559 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 DNALI1O14645 258 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 GABRR2P28476 465 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 DDR2Q16832 855 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 C15orf59Q2T9L4 293 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 PDPK2PQ6A1A2 396 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms