RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ATP5HO75947 161 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 DLDP09622 509 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 YY1P25490 414 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 SCNN1GP51170 649 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 HUNKP57058 714 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 RCN2Q14257 317 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 OR52K1Q8NGK4 314 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 WNT8BQ93098 351 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 NPY6RQ99463 290 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 SYT15Q9BQS2 421 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 NKX1-2Q9UD57 310 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 ST3GAL5Q9UNP4 418 aa16.26■□□□□ 0.19
NCKIPSD-201ENST00000294129 TPP1O14773 563 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 PGK1P00558 417 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 ERCC2P18074 760 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 WARSP23381 471 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 CLNS1AP54105 237 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 TPI1P60174 286 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 PDE1BQ01064 536 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 TOP6BLQ8N6T0 577 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 DNAAF3Q8N9W5 541 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 TTC8Q8TAM2 541 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 C20orf27Q9GZN8 174 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 ZNF180Q9UJW8 692 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 KCNA4P22459 653 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 WASHC5Q12768 1159 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 PPM1JQ5JR12 505 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 MORN1Q5T089 497 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 RFWD3Q6PCD5 774 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 CELF6Q96J87 481 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 SMOQ99835 787 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 TXNDC16Q9P2K2 825 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 PPARGC1AQ9UBK2 798 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 RPS6KL1Q9Y6S9 549 aa16.25■□□□□ 0.19
NCKIPSD-201ENST00000294129 TTC3P53804 2025 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 M0QZ92 97 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 ATP9BO43861 1147 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 LYPLA1O75608 230 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 POMCP01189 267 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 FYNP06241 537 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 RASSF2P50749 326 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 CDK16Q00536 496 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 CRYMQ14894 314 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 PDK1Q15118 436 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 CTC1Q2NKJ3 1217 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 FAM35AQ86V20 835 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 RASSF3Q86WH2 238 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 STKLD1Q8NE28 680 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 RNF34Q969K3 372 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 RILPQ96NA2 401 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 MIPEPQ99797 713 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 FERMT1Q9BQL6 677 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 INPP5FQ9Y2H2 1132 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 EIF4E1BA6NMX2 242 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 GOLGA8TH3BQL2 631 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 FCHO1O14526 889 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 PPP1R12AO14974 1030 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 GM2AP17900 193 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 CDC25CP30307 473 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 BZW1Q7L1Q6 419 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 AZIN2Q96A70 460 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 FAM105AQ9NUU6 356 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 DONSONQ9NYP3 566 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 NOP53Q9NZM5 478 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 ZFATQ9P243 1243 aa16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 PDCD11Q14690 1871 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-201ENST00000294129 HAS3O00219 553 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 CCND1P24385 295 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 ADRA1BP35368 520 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 FDFT1P37268 417 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 AQP5P55064 265 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 SESN3P58005 492 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 PURAQ00577 322 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 XKR4Q5GH76 650 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 C4orf22Q6V702 233 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 HACE1Q8IYU2 909 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 NPWQ8N729 165 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 USP33Q8TEY7 942 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 HTTP42858 3142 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 THP07101 528 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 TPH1P17752 444 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 PCBP1Q15365 356 aaKnown RBP eCLIP16.23■□□□□ 0.192e-7■■■□□ 17
NCKIPSD-201ENST00000294129 N4BP2L1Q5TBK1 243 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 PACS1Q6VY07 963 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 CMC1Q7Z7K0 106 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 ARNTL2Q8WYA1 636 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 CDKL2Q92772 493 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 ZNF669Q96BR6 464 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 MIEF2Q96C03 454 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 SIK2Q9H0K1 926 aa16.23■□□□□ 0.19
NCKIPSD-201ENST00000294129 RRAGCQ9HB90 399 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms