RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IL1R2P27930 398 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 NNMTP40261 264 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 DYNLT1P63172 113 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 SEMA3BQ13214 749 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 C10orf120Q5SQS8 335 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 TTC39BQ5VTQ0 682 aaPredicted RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 FAM217AQ8IXS0 508 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CCDC110Q8TBZ0 833 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 RMDN2Q96LZ7 410 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 OBP2AQ9NY56 170 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 MARCH2Q9P0N8 246 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 MTRF1LQ9UGC7 380 aaKnown RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 AP4E1Q9UPM8 1137 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 ZFP37Q9Y6Q3 630 aaPredicted RBP8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 C2orf16Q68DN1 1984 aa8.71□□□□□ -1.01
PTPDC1-201ENST00000288976 PGRMC1O00264 195 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 KCNK3O14649 394 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 COCHO43405 550 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 ZFXP17010 805 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 KDELR1P24390 212 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 TCEAL5Q5H9L2 206 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 C12orf50Q8NA57 414 aaPredicted RBP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 EDEM1Q92611 657 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 BTN2A3PQ96KV6 586 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 SNRNP25Q9BV90 132 aaKnown RBP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 WDCPQ9H6R7 721 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 TRPV4Q9HBA0 871 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 HOMER3Q9NSC5 361 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 ARHGAP26Q9UNA1 814 aa8.71□□□□□ -1.02
PTPDC1-201ENST00000288976 CCDC195A0A1B0GUA6 201 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SYNDIG1LA6NDD5 238 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 FGF10O15520 208 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SPATA31D3P0C874 917 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 TGM2P21980 687 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ATP11AP98196 1134 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 TFDP3Q5H9I0 405 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SPATA31D4Q6ZUB0 917 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GAREM2Q75VX8 874 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PPP4R1Q8TF05 950 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ALG3Q92685 438 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC7A5P2Q9GIP4 190 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 WASH4PA8MWX3 477 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 H3BRJ5 948 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ENC1O14682 589 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 RHOP08100 348 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 RARAP10276 462 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GABRR2P28476 465 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 L1CAMP32004 1257 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ADRA1BP35368 520 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PPP6R3Q5H9R7 873 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CREG2Q8IUH2 290 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CCDC185Q8N715 623 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 DNAAF3Q8N9W5 541 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GABPB2Q8TAK5 448 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SHKBP1Q8TBC3 707 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 KRT35Q92764 455 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 E2F7Q96AV8 911 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PABPC5Q96DU9 382 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GAS2L1Q99501 681 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ADAM7Q9H2U9 754 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GOLPH3Q9H4A6 298 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 IGFLR1Q9H665 355 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 TASP1Q9H6P5 420 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 hCG_1818297A0A087WSY0 165 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ZRANB2O95218 330 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GLP2RO95838 553 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 HMBSP08397 361 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 TFE3P19532 575 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CDKN2BP42772 138 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PGFP49763 221 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 DPYSL3Q14195 570 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 MANEALQ5VSG8 457 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 RSAD2Q8WXG1 361 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CORO1BQ9BR76 489 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 CNOT1A5YKK6 2376 aaKnown RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 MOSPD3O75425 235 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GSTA1P08263 222 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 GSTA2P09210 222 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 USP4Q13107 963 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 NME3Q13232 169 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 SLC9A4Q6AI14 798 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ZNF449Q6P9G9 518 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 Q6ZNB5 142 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 KCTD6Q8NC69 237 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 UBLCP1Q8WVY7 318 aaPredicted RBP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 S1PR5Q9H228 398 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 ZWILCHQ9H900 591 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 PCDH18Q9HCL0 1135 aa8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPDC1-201ENST00000288976 DONSONQ9NYP3 566 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms