RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 MMP13P45452 471 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 MARCKSL1P49006 195 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PARP6Q2NL67 630 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 HECTD3Q5T447 861 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PDPK2PQ6A1A2 396 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PHF21BQ96EK2 531 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 ADNPQ9H2P0 1102 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 OSGEPL1Q9H4B0 414 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 BTBD7Q9P203 1132 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 GOLGA8TH3BQL2 631 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PCDH8O95206 1070 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 MT-CO1P00395 513 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 ZNF7P17097 686 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 CCND1P24385 295 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 IFI35P80217 286 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 OTOAQ7RTW8 1153 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 GALNT4Q8N4A0 578 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 ZCCHC9Q8N567 271 aaKnown RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 RNF157Q96PX1 679 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 POLR1EQ9GZS1 481 aaKnown RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 GDF3Q9NR23 364 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 HAO1Q9UJM8 370 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 IGKV6D-41A0A0C4DH26 115 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 ADCY6O43306 1168 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 DDHD2O94830 711 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 VCLP18206 1134 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PAX3P23760 479 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 CDK16Q00536 496 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 STARD3Q14849 445 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 SPANXN3Q5MJ09 141 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 THG1LQ9NWX6 298 aaKnown RBP11.53□□□□□ -0.56
USP6NL-201ENST00000277575 TAS2R13Q9NYV9 303 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 PIK3C2AO00443 1686 aa11.53□□□□□ -0.56
USP6NL-201ENST00000277575 A0A0A0MRY4 1105 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 CARNS1A5YM72 827 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 E9PBE3 544 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 OPLAHO14841 1288 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 FGF10O15520 208 aaPredicted RBP11.52□□□□□ -0.56
USP6NL-201ENST00000277575 KLHL41O60662 606 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 IGSF6O95976 241 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 ITGB6P18564 788 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 HDCP19113 662 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 BCL2L1Q07817 233 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.56
USP6NL-201ENST00000277575 GRTP1Q5TC63 336 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 PHACTR4Q8IZ21 702 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.56
USP6NL-201ENST00000277575 SEMA4DQ92854 862 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 MYLPFQ96A32 169 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 SPATA13Q96N96 652 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 PRDM12Q9H4Q4 367 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 CCDC134Q9H6E4 229 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 ZNF556Q9HAH1 456 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 PTCH2Q9Y6C5 1203 aa11.52□□□□□ -0.56
USP6NL-201ENST00000277575 IGLV3-22A0A075B6J6 115 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 B4GALT4O60513 344 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 TRIM13O60858 407 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ALDH1A2O94788 518 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ELNP15502 786 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 PRIM2P49643 509 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 DMC1Q14565 340 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ITIH4Q14624 930 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ZC3H12BQ5HYM0 836 aaKnown RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 RAP1GAP2Q684P5 730 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 PRELID2Q8N945 189 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 CNDP1Q96KN2 507 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 C2orf49Q9BVC5 232 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ELOVL6Q9H5J4 265 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 SELENONQ9NZV5 590 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 SCHIP1Q9P0W5 487 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NCANO14594 1321 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 SCAMP3O14828 347 aaKnown RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 MMP3P08254 477 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 HPCAP84074 193 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 FAAP100Q0VG06 881 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ITGA7Q13683 1181 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 AP1ARQ63HQ0 302 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 NPNTQ6UXI9 565 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 BBS12Q6ZW61 710 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 MTDHQ86UE4 582 aaKnown RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 SLC22A9Q8IVM8 553 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ZNF555Q8NEP9 628 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 BSNDQ8WZ55 320 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 KREMEN1Q96MU8 473 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 SRPK1Q96SB4 655 aaKnown RBP11.52□□□□□ -0.57
USP6NL-201ENST00000277575 YIPF3Q9GZM5 350 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ETNK2Q9NVF9 386 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 ARHGAP28Q9P2N2 729 aa11.52□□□□□ -0.57
USP6NL-201ENST00000277575 RAD54BQ9Y620 910 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms