RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PLAC1Q9HBJ0 212 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 STX18Q9P2W9 335 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 PCDHA11Q9Y5I1 949 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 ANK1P16157 1881 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 A0A087WZ62 844 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 SNNO75324 88 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF189O75820 626 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CKBP12277 381 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 INSRRP14616 1297 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 ARF4P18085 180 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 BST1Q10588 318 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 NAB1Q13506 487 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CDO1Q16878 200 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 ARHGAP17Q68EM7 881 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CAPRIN2Q6IMN6 1127 aaKnown RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 APBB1IPQ7Z5R6 666 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 NUDCD3Q8IVD9 361 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 CCDC110Q8TBZ0 833 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 FDXACB1Q9BRP7 624 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 C11orf84Q9BUA3 381 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 C1orf21Q9H246 121 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 FBXO6Q9NRD1 293 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-201ENST00000277198 MOCS1Q9NZB8 636 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 HESX1Q9UBX0 185 aa13.31□□□□□ -0.28
C9orf3-201ENST00000277198 FAM237BA0A1B0GVD1 139 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 ALDH1A2O94788 518 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 CYP2F1P24903 491 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 FDFT1P37268 417 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 PBX2P40425 430 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 GRM5P41594 1212 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 HDAC4P56524 1084 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 SLC34A1Q06495 639 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 CCDC6Q16204 474 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 DNAL1Q4LDG9 190 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF618Q5T7W0 954 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 RASIP1Q5U651 963 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 PMF1Q6P1K2 205 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 DSTYKQ6XUX3 929 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 PIWIL1Q96J94 861 aaKnown RBP13.3□□□□□ -0.28
C9orf3-201ENST00000277198 QKIQ96PU8 341 aaKnown RBP eCLIP13.3□□□□□ -0.287e-9■■■■■ 36.2
C9orf3-201ENST00000277198 NMUR2Q9GZQ4 415 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 FAM96AQ9H5X1 160 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF212Q9UDV6 495 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
C9orf3-201ENST00000277198 NVLO15381 856 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 NBNO60934 754 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 BPGMP07738 259 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 SERPINA6P08185 405 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 CTSHP09668 335 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ABL2P42684 1182 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 RPL34P49207 117 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ADAM17P78536 824 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 LBRQ14739 615 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 DCAF4L1Q3SXM0 396 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PPP1R26Q5T8A7 1209 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 STEAP4Q687X5 459 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF534Q76KX8 674 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 DPH6Q7L8W6 267 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 SLC26A9Q7LBE3 791 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 SERINC5Q86VE9 423 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PSTKQ8IV42 348 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ARMC2Q8NEN0 867 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 STMN2Q93045 179 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 NAT9Q9BTE0 207 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 SMYD2Q9NRG4 433 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 ZFATQ9P243 1243 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PAPSS1O43252 624 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-201ENST00000277198 GRAP2O75791 330 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PSMG1O95456 288 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 SKIP12755 728 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 L1CAMP32004 1257 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PGM1P36871 562 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 THPOP40225 353 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 IGBP1P78318 339 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 MUM1Q2TAK8 710 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
C9orf3-201ENST00000277198 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms