RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TMEM131Q92545 1883 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 SLC35C1Q96A29 364 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 PLD4Q96BZ4 506 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 SIPA1Q96FS4 1042 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 FAXDC2Q96IV6 333 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 PRICKLE1Q96MT3 831 aaPredicted RBP9.35□□□□□ -0.91
TPM3-201ENST00000271850 BTBD3Q9Y2F9 522 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 ZNF510Q9Y2H8 683 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 NFE2L3Q9Y4A8 694 aa9.35□□□□□ -0.91
TPM3-201ENST00000271850 A0A1B0GTW7 788 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 A0A1B0GVT2 93 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 PIK3R2O00459 728 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 NDUFS2O75306 463 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 IGLV3-27P01718 113 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 FYNP06241 537 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 EPHX1P07099 455 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 SYPP08247 313 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 CD70P32970 193 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 DAOAP59103 153 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 SCAPQ12770 1279 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 SLC14A1Q13336 389 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 STARD3Q14849 445 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 EIF4HQ15056 248 aaKnown RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 COBLL1Q53SF7 1204 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 BSPRYQ5W0U4 402 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 ANKRD40Q6AI12 368 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 PMF1Q6P1K2 205 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 RFWD3Q6PCD5 774 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 RABEPKQ7Z6M1 372 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 GLRX5Q86SX6 157 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 TADA2BQ86TJ2 420 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 PROSER1Q86XN7 944 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 FMR1NBQ8N0W7 255 aaPredicted RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 ENGASEQ8NFI3 743 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 CADM4Q8NFZ8 388 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 SPATA20Q8TB22 786 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 DDI1Q8WTU0 396 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 FOXJ1Q92949 421 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 CDK5RAP1Q96SZ6 601 aaKnown RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 DCLK3Q9C098 648 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 CIPCQ9C0C6 399 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 FAM124BQ9H5Z6 455 aaPredicted RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 PRSS16Q9NQE7 514 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 ABCB8Q9NUT2 735 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 SERGEFQ9UGK8 458 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 EIF2B4Q9UI10 523 aaKnown RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 INTS6Q9UL03 887 aaKnown RBP9.34□□□□□ -0.91
TPM3-201ENST00000271850 BPTFQ12830 3046 aa9.34□□□□□ -0.91
TPM3-201ENST00000271850 ACACAQ13085 2346 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 MEI4A8MW99 385 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 NPC1O15118 1278 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 BCAT2O15382 392 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 ZBTB24O43167 697 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 BMP6P22004 513 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 RPL13P26373 211 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 CSNK1EP49674 416 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 RGS7P49802 495 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 ZNF132P52740 706 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 BCAT1P54687 386 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 RPS14P62263 151 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 BST2Q10589 180 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 LRMPQ12912 555 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 ZNF423Q2M1K9 1284 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 KIF19Q2TAC6 998 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 HLA-BQ31612 363 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 DCAF17Q5H9S7 520 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 WDR45BQ5MNZ6 344 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 PIK3R6Q5UE93 754 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 MSANTD2Q6P1R3 559 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 CCNI2Q6ZMN8 369 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 CHST9Q7L1S5 443 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 RSRC2Q7L4I2 434 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 SCML4Q8N228 414 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 OR2T3Q8NH03 318 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 PRCCQ92733 491 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 SLC2A11Q9BYW1 496 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 MIR1-1HGQ9H1L0 117 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 GAREM1Q9H706 876 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 EBF2Q9HAK2 575 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 SUSD2Q9UGT4 822 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 XPO7Q9UIA9 1087 aaKnown RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.33□□□□□ -0.92
TPM3-201ENST00000271850 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
TPM3-201ENST00000271850 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 H0Y626 953 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 KCNK3O14649 394 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 CETN3O15182 167 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 SLC16A3O15427 465 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 SYNCRIPO60506 623 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 TRIM16O95361 564 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 IGHV4-34P06331 123 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 HSP90AA1P07900 732 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms