RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 P2RY11Q96G91 374 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 PKNOX2Q96KN3 472 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 FCRL2Q96LA5 508 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TTC25Q96NG3 672 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 FERMT1Q9BQL6 677 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 OLA1Q9NTK5 396 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 AFF4Q9UHB7 1163 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 NOVA2Q9UNW9 492 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 NEU3Q9UQ49 428 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 MKI67P46013 3256 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 A0A0A0MRY4 1105 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 RNF103O00237 685 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ALOX15BO15296 676 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 STK10O94804 968 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 METTL18O95568 372 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TBX18O95935 607 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 URODP06132 367 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 CAPN2P17655 700 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 MTM1Q13496 603 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 MSS51Q4VC12 460 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ANKRD20A2Q5SQ80 823 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ANKRD20A1Q5TYW2 823 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ANKRD20A3Q5VUR7 823 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 CROCCP2Q86T23 111 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
SCAF11-201ENST00000266589 MIB1Q86YT6 1006 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 PDIK1LQ8N165 341 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ZNF461Q8TAF7 563 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 SLC39A13Q96H72 371 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TTLL2Q9BWV7 592 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 SEPT10Q9P0V9 454 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 HS3ST4Q9Y661 456 aa11.91□□□□□ -0.5
SCAF11-201ENST00000266589 ALPK3Q96L96 1907 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 EIF3HO15372 352 aaKnown RBP eCLIP11.9□□□□□ -0.5
SCAF11-201ENST00000266589 NCAM2O15394 837 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 RGS16O15492 202 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-201ENST00000266589 ABLIM3O94929 683 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 SEC24AO95486 1093 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 APRTP07741 180 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 ABHD2P08910 425 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 ZDHHC11BP0C7U3 371 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 SLC2A3P11169 496 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 NR1D1P20393 614 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 HTR7P34969 479 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 BBS9Q3SYG4 887 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 C6orf118Q5T5N4 469 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 MANEALQ5VSG8 457 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 TBC1D31Q96DN5 1066 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 PGM2Q96G03 612 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 CEP295NLQ96MC4 621 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 CEP41Q9BYV8 373 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 ROPN1BQ9BZX4 212 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-201ENST00000266589 ROPN1Q9HAT0 212 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-201ENST00000266589 CYP4F11Q9HBI6 524 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 MARCH2Q9P0N8 246 aa11.9□□□□□ -0.5
SCAF11-201ENST00000266589 A0A087WUV0 522 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 CARNS1A5YM72 827 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 E7ESA3 106 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 E9PAM4 449 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 APOEP02649 317 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 MX2P20592 715 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 DNAJB2P25686 324 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 HOXC13P31276 330 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 HPDP32754 393 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 MAGEA6P43360 314 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 PPIDQ08752 370 aaKnown RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 GALNT2Q10471 571 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 TRIP4Q15650 581 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 TPGS2Q68CL5 300 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 CAPN12Q6ZSI9 719 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 C16orf59Q7L2K0 433 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 PYROXD1Q8WU10 500 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 AUTS2Q8WXX7 1259 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 HDAC11Q96DB2 347 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 CELF6Q96J87 481 aaKnown RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 SERPINB12Q96P63 405 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 WDR83Q9BRX9 315 aaKnown RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 UBE2OQ9C0C9 1292 aaKnown RBP11.9□□□□□ -0.51
SCAF11-201ENST00000266589 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 CCSER2Q9H7U1 834 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 VPS37BQ9H9H4 285 aa11.9□□□□□ -0.51
SCAF11-201ENST00000266589 SHROOM3Q8TF72 1996 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 SLC12A8A0AV02 714 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 E7EVH7 732 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 KCNK1O00180 336 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 TLR5O60602 858 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 OPHN1O60890 802 aa11.89□□□□□ -0.51
SCAF11-201ENST00000266589 EN2P19622 333 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-201ENST00000266589 PPM1AP35813 382 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 392.8 ms