RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 USP1O94782 785 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 CHEK2O96017 543 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ITGB3P05106 788 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 CNTFP26441 200 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ECHS1P30084 290 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 HADHBP55084 474 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 NUP107P57740 925 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 MAMLD1Q13495 774 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ITGA9Q13797 1035 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 STKLD1Q8NE28 680 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 TMEM174Q8WUU8 243 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ZNF333Q96JL9 665 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 OSMRQ99650 979 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 FZD8Q9H461 694 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 FAM124BQ9H5Z6 455 aaPredicted RBP11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 GID8Q9NWU2 228 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 TRPV2Q9Y5S1 764 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 RPS6KL1Q9Y6S9 549 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 SSC5DA1L4H1 1573 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 HNRNPRO43390 633 aaKnown RBP11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 TPST1O60507 370 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 CXCL8P10145 99 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ADORA2BP29275 332 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 TAS2R40P59535 323 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 STX5Q13190 355 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 SLC5A9Q2M3M2 681 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 PRAMEF19Q5SWL8 479 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 RNF148Q8N7C7 305 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ZSWIM2Q8NEG5 633 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 URGCPQ8TCY9 931 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 DNAJB3Q8WWF6 145 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 ADNPQ9H2P0 1102 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 PDLIM7Q9NR12 457 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 USP18Q9UMW8 372 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 STYXL1Q9Y6J8 313 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 CNTNAP2Q9UHC6 1331 aa11.83□□□□□ -0.52
CLSTN3-201ENST00000266546 CCDC78A2IDD5 438 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CYP1B1Q16678 543 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ACSBG2Q5FVE4 666 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 RFWD3Q6PCD5 774 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SAPCD2Q86UD0 394 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 FAM228AQ86W67 206 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 IFNEQ86WN2 208 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 RBM15BQ8NDT2 890 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 GSTCDQ8NEC7 633 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ATP6V1E2Q96A05 226 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TCF7L2Q9NQB0 619 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 MRGBPQ9NV56 204 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 DERAQ9Y315 318 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 EME2A4GXA9 379 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 F8W8V4 182 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 E2F6O75461 281 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 VDRP11473 427 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 RAB27AP51159 221 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CRYBB1P53674 252 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 PTK2BQ14289 1009 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 FAM187BQ17R55 369 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SEL1L3Q68CR1 1132 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ITPRIPL1Q6GPH6 555 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TAPT1Q6NXT6 567 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 AAGABQ6PD74 315 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 PCYOX1LQ8NBM8 494 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 UBA3Q8TBC4 463 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 GIPC2Q8TF65 315 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CNDP1Q96KN2 507 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 PCYT2Q99447 389 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CISHQ9NSE2 258 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ANGPT2O15123 496 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SRP72O76094 671 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SNAI1O95863 264 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TAF6P49848 677 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 MRPS22P82650 360 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 FSTL1Q12841 308 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 DPYSL3Q14195 570 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TRIM16LQ309B1 348 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 HABP4Q5JVS0 413 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 RBM44Q6ZP01 1051 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 DENND5BQ6ZUT9 1274 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 LENG1Q96BZ8 264 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 DGCR14Q96DF8 476 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 CPB2Q96IY4 423 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 KREMEN1Q96MU8 473 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TMEM79Q9BSE2 394 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 FAM49BQ9NUQ9 324 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TAS2R1Q9NYW7 299 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ZNF229Q9UJW7 825 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SLC39A10Q9ULF5 831 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 STAP1Q9ULZ2 295 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 SDR42E2A6NKP2 422 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 ADSSP30520 456 aa11.82□□□□□ -0.52
CLSTN3-201ENST00000266546 RPL22P35268 128 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms