RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CES3Q6UWW8 571 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 TEKT4Q8WW24 435 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 MYLPFQ96A32 169 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 XPNPEP1Q9NQW7 623 aa15.78■□□□□ 0.12
TIMP3-201ENST00000266085 GOLGA4Q13439 2230 aaKnown RBP15.78■□□□□ 0.12
TIMP3-201ENST00000266085 NT5C1B-RDH14C9J2C7 533 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 SLCO1B7G3V0H7 640 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 KDM1AO60341 852 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 TRIM16O95361 564 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 SOX11P35716 441 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 ZFP42Q96MM3 310 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 MRPL17Q9NRX2 175 aaKnown RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 WDR27A2RRH5 827 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 EIF4E1BA6NMX2 242 aaKnown RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 OPLAHO14841 1288 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 VAPBO95292 243 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 FKBP9O95302 570 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 SMPD1P17405 629 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 PGAM1P18669 254 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 BGNP21810 368 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 TUSC3Q13454 348 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 PABPC1LQ4VXU2 614 aaKnown RBP15.77■□□□□ 0.12
TIMP3-201ENST00000266085 TSHZ1Q6ZSZ6 1077 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 FKBP9P1Q75LS8 142 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 KCNMB4Q86W47 210 aa15.77■□□□□ 0.12
TIMP3-201ENST00000266085 PFDN1O60925 122 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 THRAP10827 490 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 CORO7P57737 925 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 CDK16Q00536 496 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 GRIK3Q13003 919 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 DCLRE1AQ6PJP8 1040 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 SLC7A5P2Q9GIP4 190 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 TUBGCP4Q9UGJ1 667 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 CLCA2Q9UQC9 943 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 GPR25O00155 361 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 ZSCAN9O15535 394 aaPredicted RBP15.77■□□□□ 0.11
TIMP3-201ENST00000266085 ADCY6O43306 1168 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 CDH2P19022 906 aaPredicted RBP15.77■□□□□ 0.11
TIMP3-201ENST00000266085 JAG1P78504 1218 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 SLC45A4Q5BKX6 768 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.11
TIMP3-201ENST00000266085 TCP10LQ8TDR4 215 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 EFCAB1Q9HAE3 211 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 PCYOX1Q9UHG3 505 aa15.77■□□□□ 0.11
TIMP3-201ENST00000266085 C9orf57Q5W0N0 161 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 CLEC4FQ8N1N0 589 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 PRELID2Q8N945 189 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 CD99L2Q8TCZ2 262 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 CEP19Q96LK0 163 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 RBBP8Q99708 897 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 MRPL45Q9BRJ2 306 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 UTP6Q9NYH9 597 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 SPASTQ9UBP0 616 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 PADI3Q9ULW8 664 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 SLC27A5Q9Y2P5 690 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 RNASEH1O60930 286 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 XYLBO75191 536 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 IFI35P80217 286 aaPredicted RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 FLOT2Q14254 428 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 CYTH1Q15438 398 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 SDHAF4Q5VUM1 108 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 HAO1Q9UJM8 370 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 SOX13Q9UN79 622 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 ERI2A8K979 691 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 TPBGLP0DKB5 382 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 HSPA1AP0DMV8 641 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 HSPA1BP0DMV9 641 aaKnown RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 MZF1P28698 734 aaPredicted RBP15.76■□□□□ 0.11
TIMP3-201ENST00000266085 KCNA10Q16322 511 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 ZCWPW2Q504Y3 356 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 ZNF470Q6ECI4 717 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 NPNTQ6UXI9 565 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 POLNQ7Z5Q5 900 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 HOMEZQ8IX15 550 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 OR9Q1Q8NGQ5 310 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 SLC40A1Q9NP59 571 aa15.76■□□□□ 0.11
TIMP3-201ENST00000266085 PAX3P23760 479 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SLC35G1Q2M3R5 365 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 AP1ARQ63HQ0 302 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PDPK2PQ6A1A2 396 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 LLGL2Q6P1M3 1020 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 BRI3BPQ8WY22 251 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 RNF157Q96PX1 679 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 ECSITQ9BQ95 431 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 EIF3LQ9Y262 564 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 REXO2Q9Y3B8 237 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PCDHA2Q9Y5H9 948 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 PARP6Q2NL67 630 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 SPANXN3Q5MJ09 141 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 HECTD3Q5T447 861 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 N4BP2L1Q5TBK1 243 aaPredicted RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 BBS12Q6ZW61 710 aa15.75■□□□□ 0.11
TIMP3-201ENST00000266085 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
TIMP3-201ENST00000266085 A0A096LPK6 155 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms