RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PGBD4Q96DM1 585 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DUSP9Q99956 384 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HOPXQ9BPY8 73 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PCDH12Q9NPG4 1184 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 VAV3Q9UKW4 847 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PPME1Q9Y570 386 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 SNAP23O00161 211 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ALOX15BO15296 676 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 RECQL5O94762 991 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DHFRP00374 187 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PHKG2P15735 406 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HNF4AP41235 474 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HARS2P49590 506 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CASP4P49662 377 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CCT8P50990 548 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 SCN1BQ07699 218 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 COLGALT2Q8IYK4 626 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DEPDC4Q8N2C3 294 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CGREF1Q99674 301 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CDCA7Q9BWT1 371 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ERBB3P21860 1342 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CHADO15335 359 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PRKAB2O43741 272 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CSDE1O75534 798 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 IGKV5-2P06315 115 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 FOSL1P15407 271 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ATP6V1B2P21281 511 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 C1QBPQ07021 282 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CYP51A1Q16850 503 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 INSCQ1MX18 579 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 SPANXN3Q5MJ09 141 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 RYBPQ8N488 228 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 FAM47BQ8NA70 645 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 VPS37AQ8NEZ2 397 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CITED4Q96RK1 184 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 BCL7BQ9BQE9 202 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 IRF2BPLQ9H1B7 796 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF696Q9H7X3 374 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DNAJC18Q9H819 358 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT2B11O75310 529 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 GNAZP19086 355 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 RRM2P31350 389 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 RAD51Q06609 339 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 KLRC3Q07444 240 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF699Q32M78 642 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 AGKQ53H12 422 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 INO80DQ53TQ3 878 aaPredicted RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ACSBG2Q5FVE4 666 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 PPM1LQ5SGD2 360 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 BORAQ6PGQ7 559 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 AMIGO2Q86SJ2 522 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 IFNEQ86WN2 208 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 RBM15BQ8NDT2 890 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 KBTBD7Q8WVZ9 684 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 LRRC4Q9HBW1 653 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 DDX43Q9NXZ2 648 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 HSPBP1Q9NZL4 362 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 POLG2Q9UHN1 485 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 PRKD3O94806 890 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 RARBP10826 455 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 PCSK2P16519 638 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 BAG6P46379 1132 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 LGALS3BPQ08380 585 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF394Q53GI3 561 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 GLRA4Q5JXX5 417 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CACHD1Q5VU97 1274 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CCSAPQ6IQ19 270 aaPredicted RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 POU5F2Q8N7G0 328 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ASCC1Q8N9N2 400 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 AGR3Q8TD06 166 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 PLA2G12BQ9BX93 195 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 HDHD2Q9H0R4 259 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 DOLKQ9UPQ8 538 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 SLC30A1Q9Y6M5 507 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 A0A0J9YVX5 310 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 FAM237BA0A1B0GVD1 139 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CAPN8A6NHC0 703 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 FSCN2O14926 492 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 HAT1O14929 419 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 TMCC2O75069 709 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 SOAT2O75908 522 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 MAPTP10636 758 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 AKAP5P24588 427 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ATP6V1E1P36543 226 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 FLT3P36888 993 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ECT2LQ008S8 904 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 NRF1Q16656 503 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 GALNTL6Q49A17 601 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms