RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RWDD4Q6NW29 188 aaKnown RBP23.04■■□□□ 1.28
SIX3-201ENST00000260653 CCDC13Q8IYE1 715 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 AUTS2Q8WXX7 1259 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 P2RY11Q96G91 374 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 HERC2P3Q9BVR0 1158 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 C5orf60A6NFR6 353 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 PPP1R12AO14974 1030 aaPredicted RBP23.04■■□□□ 1.28
SIX3-201ENST00000260653 METTL18O95568 372 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 SLCO1A2P46721 670 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 ARL4CP56559 192 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 SLC39A13Q96H72 371 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 ETNK1Q9HBU6 452 aa23.04■■□□□ 1.28
SIX3-201ENST00000260653 AFF4Q9UHB7 1163 aaKnown RBP23.04■■□□□ 1.28
SIX3-201ENST00000260653 CHADO15335 359 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 EN2P19622 333 aaPredicted RBP23.03■■□□□ 1.28
SIX3-201ENST00000260653 DNAJB2P25686 324 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 C10orf120Q5SQS8 335 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 MIB1Q86YT6 1006 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 ANKMY2Q8IV38 441 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 ZNF461Q8TAF7 563 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 CEP41Q9BYV8 373 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 KLC2Q9H0B6 622 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 SMAPO00193 183 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 PSEN1P49768 467 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 TBX4P57082 545 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 ARTNQ5T4W7 220 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 PDZD4Q76G19 769 aaPredicted RBP23.03■■□□□ 1.28
SIX3-201ENST00000260653 WDR83Q9BRX9 315 aaKnown RBP23.03■■□□□ 1.28
SIX3-201ENST00000260653 COMMD8Q9NX08 183 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 HS3ST4Q9Y661 456 aa23.03■■□□□ 1.28
SIX3-201ENST00000260653 RNF103O00237 685 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 ALOX15BO15296 676 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 ABLIM3O94929 683 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 TUFMP49411 452 aaKnown RBP23.02■■□□□ 1.28
SIX3-201ENST00000260653 DMTNQ08495 405 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 LONRF1Q17RB8 773 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 MANEALQ5VSG8 457 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 ARHGEF18Q6ZSZ5 1173 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 UBE2Q1Q7Z7E8 422 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 DDX53Q86TM3 631 aaKnown RBP23.02■■□□□ 1.28
SIX3-201ENST00000260653 VPS52Q8N1B4 723 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 TMEM109Q9BVC6 243 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 TTLL2Q9BWV7 592 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 CCSER2Q9H7U1 834 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 SEPT10Q9P0V9 454 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 ALPK3Q96L96 1907 aa23.02■■□□□ 1.28
SIX3-201ENST00000260653 A0A0A0MRY4 1105 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 URODP06132 367 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 APRTP07741 180 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 ZDHHC11BP0C7U3 371 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 ANKRD20A2Q5SQ80 823 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 ANKRD20A1Q5TYW2 823 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 ANKRD20A3Q5VUR7 823 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 CAPN12Q6ZSI9 719 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 CELF6Q96J87 481 aaKnown RBP23.02■■□□□ 1.27
SIX3-201ENST00000260653 SPATA13Q96N96 652 aa23.02■■□□□ 1.27
SIX3-201ENST00000260653 NOVA2Q9UNW9 492 aaKnown RBP23.02■■□□□ 1.27
SIX3-201ENST00000260653 F5H423 210 aaPredicted RBP23.01■■□□□ 1.27
SIX3-201ENST00000260653 RASGRF2O14827 1237 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 AGBL2Q5U5Z8 902 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 PIK3R6Q5UE93 754 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 PDIK1LQ8N165 341 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 DEPDC1BQ8WUY9 529 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 CYP4F11Q9HBI6 524 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 OLA1Q9NTK5 396 aaKnown RBP23.01■■□□□ 1.27
SIX3-201ENST00000260653 MARCH2Q9P0N8 246 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 SHROOM3Q8TF72 1996 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 E7ESA3 106 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 KCNK1O00180 336 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 CLGNO14967 610 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 SERPINB6P35237 376 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 BBS9Q3SYG4 887 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 C14orf80Q86SX3 495 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 BADQ92934 168 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 PHACTR1Q9C0D0 580 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 RAD54BQ9Y620 910 aa23.01■■□□□ 1.27
SIX3-201ENST00000260653 TLR5O60602 858 aa23■■□□□ 1.27
SIX3-201ENST00000260653 HOXC13P31276 330 aa23■■□□□ 1.27
SIX3-201ENST00000260653 WASHC5Q12768 1159 aa23■■□□□ 1.27
SIX3-201ENST00000260653 C4orf22Q6V702 233 aa23■■□□□ 1.27
SIX3-201ENST00000260653 EXOC4Q96A65 974 aa23■■□□□ 1.27
SIX3-201ENST00000260653 TBC1D31Q96DN5 1066 aa23■■□□□ 1.27
SIX3-201ENST00000260653 TTC25Q96NG3 672 aa23■■□□□ 1.27
SIX3-201ENST00000260653 AVILO75366 819 aa23■■□□□ 1.27
SIX3-201ENST00000260653 NR1D1P20393 614 aa23■■□□□ 1.27
SIX3-201ENST00000260653 HPDP32754 393 aaPredicted RBP23■■□□□ 1.27
SIX3-201ENST00000260653 MAGEA6P43360 314 aa23■■□□□ 1.27
SIX3-201ENST00000260653 GALNT2Q10471 571 aa23■■□□□ 1.27
SIX3-201ENST00000260653 TPGS2Q68CL5 300 aa23■■□□□ 1.27
SIX3-201ENST00000260653 SERPINB12Q96P63 405 aa23■■□□□ 1.27
SIX3-201ENST00000260653 UBE2OQ9C0C9 1292 aaKnown RBP23■■□□□ 1.27
SIX3-201ENST00000260653 E9PAM4 449 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 NCAM2O15394 837 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 GJB5O95377 273 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 HMBSP08397 361 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 ABHD2P08910 425 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 SLC2A3P11169 496 aa22.99■■□□□ 1.27
SIX3-201ENST00000260653 PPIDQ08752 370 aaKnown RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 TRIP4Q15650 581 aaPredicted RBP22.99■■□□□ 1.27
SIX3-201ENST00000260653 PGM2Q96G03 612 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms