RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 PLD6Q8N2A8 252 aaKnown RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 MIPOL1Q8TD10 442 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SEPT1Q8WYJ6 367 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 CMTM5Q96DZ9 223 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 R3HDMLQ9H3Y0 253 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SYBUQ9NX95 663 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ARHGAP26Q9UNA1 814 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 AP4E1Q9UPM8 1137 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 HEMK1Q9Y5R4 338 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ANKRD12Q6UB98 2062 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 CHADO15335 359 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ADCY6O43306 1168 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SUPT3HO75486 399 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 DHRS4L1P0CG22 281 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 P4HA1P13674 534 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 VAV1P15498 845 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SLC10A2Q12908 348 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ERLEC1Q96DZ1 483 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 C7orf26Q96N11 449 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 CCDC106Q9BWC9 280 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 XYLT2Q9H1B5 865 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF711Q9Y462 761 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 E7ESA3 106 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SPAG6O75602 509 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 NPM3O75607 178 aaKnown RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ARSAP15289 507 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF132P52740 706 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 NAGLUP54802 743 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 DYNC1I2Q13409 638 aaKnown RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF460Q14592 562 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 TEDDM1Q5T9Z0 273 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 CDKL3Q8IVW4 592 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 EME1Q96AY2 570 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 RCN3Q96D15 328 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 TRAPPC9Q96Q05 1148 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 NT5C1AQ9BXI3 368 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
USHBP1-201ENST00000252597 ATXN3LQ9H3M9 355 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SIX4Q9UIU6 781 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 V9GYQ6 96 aa12.29□□□□□ -0.44
USHBP1-201ENST00000252597 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 FKBP6O75344 327 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 UQCRBP14927 111 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 MX2P20592 715 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 GPD2P43304 727 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 EFNA5P52803 228 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 TNFAIP1Q13829 316 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CCNIQ14094 377 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 RPS27LQ71UM5 84 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CTU1Q7Z7A3 348 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 MYLK4Q86YV6 388 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 TDRD5Q8NAT2 981 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 BHLHE22Q8NFJ8 381 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 RDM1Q8NG50 284 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 RNF34Q969K3 372 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF778Q96MU6 729 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 NPAS2Q99743 824 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 DCUN1D5Q9BTE7 237 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 DHRS4Q9BTZ2 278 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF214Q9UL59 606 aaPredicted RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 A0A096LPK6 155 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 HMX2A2RU54 273 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 C9JVG2 144 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 TK2O00142 265 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 RNF103O00237 685 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 PPEF2O14830 753 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 ALDOAP04075 364 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 COX4I1P13073 169 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 TMEM132DQ14C87 1099 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 STILQ15468 1287 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 ZNF354CQ86Y25 554 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 HOMEZQ8IX15 550 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 MFSD3Q96ES6 412 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 OLFM3Q96PB7 478 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 PTPRHQ9HD43 1115 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 SSU72Q9NP77 194 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 IARS2Q9NSE4 1012 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 GALNT8Q9NY28 637 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CNTN3Q9P232 1028 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
USHBP1-201ENST00000252597 TLK1Q9UKI8 766 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 LZTS1Q9Y250 596 aa12.28□□□□□ -0.44
USHBP1-201ENST00000252597 SDR42E2A6NKP2 422 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 MAFGO15525 162 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 GLRA3O75311 464 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 LTFP02788 710 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 SERPINE1P05121 402 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 ACAT1P24752 427 aaKnown RBP12.27□□□□□ -0.44
USHBP1-201ENST00000252597 GRIA2P42262 883 aa12.27□□□□□ -0.44
USHBP1-201ENST00000252597 GALK1P51570 392 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms