RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 LRCH4O75427 683 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 USP17L7P0C7H9 530 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ME2P23368 584 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MPSTP25325 297 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PTK2BQ14289 1009 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 KYAT3Q6YP21 454 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CERKQ8TCT0 537 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 DDI1Q8WTU0 396 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM134Q9H6X4 195 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SLIT2O94813 1529 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PHRF1Q9P1Y6 1649 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CACNA1SQ13698 1873 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SYCE1LA8MT33 242 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ASMTLO95671 621 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CLPTM1O96005 669 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TSPY1Q01534 308 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ACAP1Q15027 740 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 WLSQ5T9L3 541 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SCIMPQ6UWF3 145 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ZC3H3Q8IXZ2 948 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GIPC2Q8TF65 315 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SEMA6AQ9H2E6 1030 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MAN1C1Q9NR34 630 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 AFF4Q9UHB7 1163 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 RIPK3Q9Y572 518 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 YDJCA8MPS7 323 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 COX4I1P13073 169 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 FUT11Q495W5 492 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GPR141Q7Z602 305 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MFN1Q8IWA4 741 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ADGRF2Q8IZF7 708 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SYT15Q9BQS2 421 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ULBP1Q9BZM6 244 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GID8Q9NWU2 228 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SOX13Q9UN79 622 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TIMM13Q9Y5L4 95 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 F7P08709 466 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ARL2P36404 184 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GDF10P55107 478 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 FOLH1Q04609 750 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 WASHC5Q12768 1159 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 FAM83EQ2M2I3 478 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 VWA5B1Q5TIE3 1220 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF470Q6ECI4 717 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 C10orf107Q8IVU9 208 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ACE2Q9BYF1 805 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 BTBD7Q9P203 1132 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 VANGL2Q9ULK5 521 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 LYPLA2O95372 231 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CD4P01730 458 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GRIK1P39086 918 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 HADHBP55084 474 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CSHL1Q14406 222 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM132BQ14DG7 1078 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SPANXN3Q5MJ09 141 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SPDYAQ5MJ70 313 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 RBM44Q6ZP01 1051 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 FRA10AC1Q70Z53 315 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CCNJLQ8IV13 435 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 WDCPQ9H6R7 721 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CNTNAP2Q9UHC6 1331 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PEX11AO75192 247 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PGM3O95394 542 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 KCNA2P16389 499 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CNTFP26441 200 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PTPN7P35236 360 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF143P52747 638 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PTP4A2Q12974 167 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GALNTL6Q49A17 601 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ANGPTL8Q6UXH0 198 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ZBTB49Q6ZSB9 765 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MARK2Q7KZI7 788 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ANKS1BQ7Z6G8 1248 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GPR88Q9GZN0 384 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 XPNPEP1Q9NQW7 623 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ITGA11Q9UKX5 1188 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 NR2E3Q9Y5X4 410 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 LRP6O75581 1613 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TRPC5OSA6NMA1 111 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 NR2C2P49116 596 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 AMIGO2Q86SJ2 522 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ABI1Q8IZP0 508 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PKD1L3Q7Z443 1732 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TIAM2Q8IVF5 1701 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TADA2AO75478 443 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 UNGP13051 313 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 STMN1P16949 149 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PIK3R1P27986 724 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PPIDQ08752 370 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 FSTL1Q12841 308 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ACSBG2Q5FVE4 666 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 LPCAT4Q643R3 524 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 LPIN3Q9BQK8 851 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 F5P12259 2224 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CLUHO75153 1309 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ANKRD36CQ5JPF3 1778 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms